Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc135g00013 ATGGCAACAAAGGATTCTTCATCTTCCGAATTAGAATCACCAAAAAGACTCCAATACCCCTTGGACTCCAACTCATACAAGATCCTCGACGAGATCGGTTCCGGCGTCAGCGCCGTCGTCTACAAAGCAATCTGCATTCCCATGAACTCCTCACTCGTCGCCATCAAATCCATCGACCTCGACGGATCTCGCCCTGACTTCGACGACGTCCGTCGCGAAGTCAAAACCCTCTCCCTCCTCTCTCACCCCAACATCCTCAACGCACACTGTTGCTTCACTGTAGAGCACCGTCTTTGGGTAGTCATGCCGTTCATGGCCGGCGGATCTTTCCAATCCATCATCTCTCATTCCTTTCCAGACGGATTCTCAGAGCCATGCATCGCATTCATCCTCAGAGAAACTCTCAACGCTTTATCCTATCTCCATAGCCAGGGACATCTCCACAGAGACATCAAAGCCGGTAACATTCTCGTCGATTCCAACGGATCCGTGAAGCTCGCCGATTTCGGAGTCTCTGCTTCGATCTACGAGTCAATCATGAGCTCCTCTTCATCATCTTCTTCTTCAAGTGTTCCAGGTTGTTGTTCGTGTTCCTCTTTGATGCTGAAAGACGTGGCCGGAACACCGTACTGGATGGCGCCGGAAGTGATACACTCGCACGTCGGTTACAGTTTGAAGGCTGATATATGGTCGTTTGGGATCACGGCGTTGGAGTTGGCGCATGGAAGGCCTCCACTCTCTCACCTTCCTCCTTCTAAGTCCATGATTCTCAAGATCACGAAGCGGTTTCGGTTTTCAGATCTGGACAAGTTTGGTGGCGGGTCCCACGCCAAGAAATTCTCCAAGAGCTTCAAGGATATGGTTGCTTCTTGTTTAGATCAGGATCCGTCTAAGAGGCCTACGGCGGAGAAGCTTCTGAAGCATCCGTTCTTTAGAAACTGTAAGGGATCCGAGTTTTTGGTGAAGAACGTGCTTCAAGGGTTGCCTAGTGTTGAGAAGAGGTACAAGGAAATCAGCAAGGCTTCTATCAATAACAATAATGCAACTACTCCGACGAAGGTGGATGGTGATGATGAGGATGATGACGACGATGATGCAGTGAAGCATGGGAAGTTCATGAAGCAAAGAAGGATAAGTGGGTGGAATTTCAACGAAGATGGATTTGAACTTGAGCCTGTGTTCCCAAATGATGAAGTCCAAGATGATGAGTCGAAAGAAACAATCATGATGAGGAAGGCAATAAAAGAAGGTGGTGAAGGTGAGAATGAGAATGAGAATGAAAGGTTAAAGGGTATTGAAGGAGTAGCCATGAATGTGAACAACCGTGATGCCATGCTAGCAACACTGAATGTGCTTAAAGGAAGCTTGGAACAAGAGCTTGGACAAGTGAAGGCCTTGATGAACATCATACGTGGAGATCGTAATCATGATCATGATCATGATCATGATGAGGACAACAAGCAGCAGCAGTTGGAGTCCCAGCTAGACACCTTGAAGCTTCAATTTTCTTGA 1512 0.4769 MATKDSSSSELESPKRLQYPLDSNSYKILDEIGSGVSAVVYKAICIPMNSSLVAIKSIDLDGSRPDFDDVRREVKTLSLLSHPNILNAHCCFTVEHRLWVVMPFMAGGSFQSIISHSFPDGFSEPCIAFILRETLNALSYLHSQGHLHRDIKAGNILVDSNGSVKLADFGVSASIYESIMSSSSSSSSSSVPGCCSCSSLMLKDVAGTPYWMAPEVIHSHVGYSLKADIWSFGITALELAHGRPPLSHLPPSKSMILKITKRFRFSDLDKFGGGSHAKKFSKSFKDMVASCLDQDPSKRPTAEKLLKHPFFRNCKGSEFLVKNVLQGLPSVEKRYKEISKASINNNNATTPTKVDGDDEDDDDDDAVKHGKFMKQRRISGWNFNEDGFELEPVFPNDEVQDDESKETIMMRKAIKEGGEGENENENERLKGIEGVAMNVNNRDAMLATLNVLKGSLEQELGQVKALMNIIRGDRNHDHDHDHDEDNKQQQLESQLDTLKLQFS 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc135g00013 503 ProSitePatterns Protein kinases ATP-binding region signature. 32 56 IPR017441 GO:0005524
Stsc135g00013 503 SUPERFAMILY Protein kinase-like (PK-like) 13 316 IPR011009 -
Stsc135g00013 503 FunFam Serine/threonine-protein kinase BLUS1 15 104 - -
Stsc135g00013 503 FunFam Serine/threonine-protein kinase BLUS1 108 364 - -
Stsc135g00013 503 ProSiteProfiles Protein kinase domain profile. 26 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc135g00013 503 SMART serkin_6 26 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc135g00013 503 MobiDBLite consensus disorder prediction 473 490 - -
Stsc135g00013 503 Gene3D Transferase(Phosphotransferase) domain 1 108 364 - -
Stsc135g00013 503 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 18 475 IPR047173 GO:0043539
Stsc135g00013 503 MobiDBLite consensus disorder prediction 473 503 - -
Stsc135g00013 503 Gene3D Phosphorylase Kinase; domain 1 15 104 - -
Stsc135g00013 503 Pfam Protein kinase domain 26 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc135g00013 503 MobiDBLite consensus disorder prediction 342 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc135g00013 Stsc-Chr135 68133 69644 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc135g00013 16 502 MAP Kinase Kinase Kinase Kinase AT4G14480 53.614 5.24e-174 497
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Stsc135g00013 Pkinase 5.2e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc135g00013 K08835 - adu:107461391 815.453