Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc135g00002 ATGAATGAAAAAATGGACAAGAATGTTTGGATTGTGTTTGTGACACCATTGCTCTTGATCCTCATCCTCTTCTACAGAAGGATCACATGGCTTAGACTCATCAAATCTAAACACATGAATCAACTTCCCTTAGGCACTCTTGGATGGCCCTTTGTTGGTGAAACCATTGAGTTTATTTCCTGTGCCTACTCTGATCATCCTGAGAGCTTCATGGACAAGCGTCGCGGCATGTATGGGAAGGTGTTTAAGTCTCACATATTTGGGAGCCCTACAATTGTGTCCACAGATGCAGAAGTGAATAGGTTCATTCTGCAAAGTAATGCAAAGGCTTTTGTTCCTTCATATCCCAAGTCTCTGACTGAGTTGATGGGGAAGTCTTCCATTTTGCTCATCAATGGAAGCTTGCAGAGGAGAATACATGGACTAGTTGCAGCTTTCTTCAAGTCTCAGCAGCTTAAGGTTCAGATCACTAGAGAGATGCAGAACTATGTCCAAGAATCAATGGCTAATTGGAAAGAGGATCAACCTGTATACATACAAGATGAGACCAAAAATATTGCTTTCCAAGTACTAGTCAAGGCATTGATTAGTTTGGATCCTGGTGAAGAAATGGAGCTTCTGAAGAAACATTTTCAGGAATTCATGTCTGGCCTCATGTCTCTACCAATAAACTTGCCAGGAACTAAACTTCATCAATCCTTACAAGCAAAAAAGAAGATGGTGAAGTTAATGCTGAGAACTATTGAAAGTAGAAGAAAAGATGGAATCTTCAAAGTTCCAAAAGATGTAGTGGATGTGCTTCTGAATGATGAAAATGAAAGGTTAACAGATGAACTGATAGCAGATAATATGATTGATATGATGATTCCAGGAGAGGATTCTGTGCCAGTTCTTATGACTCTTGCTGTAAAGTATTTATCAGAATGCCCTACTGCTTTGCAACAATTGAGGGAGGAGAATGTGAGGATTAAGAAACTCAAAGATCAGCTTGGGGAGCCCTTGTGTTGGAGTGATTACTTATCATTACCATTTACTCAAACAGTTATCACAGAAACTTTGAGGTTAGGAAATGTGATAATTGGAGTTATGAGAAAGGCTATAAAAGATGTAGAAATAAAAGGGTATTTTATACCAAAAGGGTGGTGTGTTTTTGCATATTTTAGATCAATTCATCTGGATGACAAAAACTATGACAAGCCTTACCAATTCAATCCATGGAGGTGGCAAGACAAAGACACAAGCAGTTGCAATTTCACTCCTTTTGGAGGTGGACAGAGATTATGCCCTGGCCTTGACTTGGCAAGACTTGAGGCTTCTATCTTCCTACATCACTTGGTCACTCAGTTCAGATGGTATGCAGAAGAAGATACAATTGTGAATTTCCCCACTGTAAGAATGAAAAGAAGGATGCCAATCTTGGTTAGAAGAGTGGAATCTTAG 1440 0.3944 MNEKMDKNVWIVFVTPLLLILILFYRRITWLRLIKSKHMNQLPLGTLGWPFVGETIEFISCAYSDHPESFMDKRRGMYGKVFKSHIFGSPTIVSTDAEVNRFILQSNAKAFVPSYPKSLTELMGKSSILLINGSLQRRIHGLVAAFFKSQQLKVQITREMQNYVQESMANWKEDQPVYIQDETKNIAFQVLVKALISLDPGEEMELLKKHFQEFMSGLMSLPINLPGTKLHQSLQAKKKMVKLMLRTIESRRKDGIFKVPKDVVDVLLNDENERLTDELIADNMIDMMIPGEDSVPVLMTLAVKYLSECPTALQQLREENVRIKKLKDQLGEPLCWSDYLSLPFTQTVITETLRLGNVIIGVMRKAIKDVEIKGYFIPKGWCVFAYFRSIHLDDKNYDKPYQFNPWRWQDKDTSSCNFTPFGGGQRLCPGLDLARLEASIFLHHLVTQFRWYAEEDTIVNFPTVRMKRRMPILVRRVES 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc135g00002 479 Gene3D Cytochrome P450 33 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc135g00002 479 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 421 430 IPR017972 GO:0005506|GO:0016705
Stsc135g00002 479 PRINTS E-class P450 group I signature 418 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc135g00002 479 PRINTS E-class P450 group I signature 386 410 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc135g00002 479 PRINTS E-class P450 group I signature 428 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc135g00002 479 PRINTS E-class P450 group I signature 346 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc135g00002 479 PRINTS E-class P450 group I signature 75 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc135g00002 479 CDD CYP90-like 74 476 - -
Stsc135g00002 479 Pfam Cytochrome P450 43 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc135g00002 479 PANTHER CYTOCHROME P450 26 40 452 - -
Stsc135g00002 479 SUPERFAMILY Cytochrome P450 39 476 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc135g00002 479 FunFam 3-epi-6-deoxocathasterone 23-monooxygenase CYP90D1 32 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc135g00002 Stsc-Chr135 2014 5630 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc135g00002 38 450 Cytochrome P450 AT3G13730 67.943 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc135g00002 K12638 - gmx:100782687 791.956