Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc1357g00001 ATGTCTACATCCGCAAGAAGAAAGGTTCACCTGAACACAGTTTCAGTGAAACTAGGCTGTGGCAGCAGTTGCAGAAGGCCAAAGCTGTCTCGCATATTCCACCCTAAACCAAAGCCCAAGAACTCCACTCTCCAAAAACACAAACTTTTCAACCTCTCTTCTTGGAAATACGACACCACAACCACCACCACCAGCACCACCACCCCAACCAACACCACAGCCACCACGTTCTCCCCTTGCTACTACATTGATTCATCTCAGTTCTCAGACTCATCAGAGAGCAACAACAACAAGGAGGCCAGGAGAGTGGGAGGTCTGGGAAGAGCCGGCGGAGAAGGCGTGGCGGTGGAGAAAGAGTCCGACGACCCTTACTTGGATTTCAGGCAGTCAATGCTGCAGATGATTCTGGAGAACGAGATATACTCGAAGGAAGACCTGAGAGAGCTCCTCAACTGTTTTCTTCAGCTGAATTCACCATACCACCATGGTGTTATAGTGAGAGCTTTCACTGAGATCTGGAATGGGGTATTCTCTGTAAGGTCAAGTTCTTCAGCCAGGTTTCACTTCAACCGTAACAGTAATAGTAACAATAAGCCATTCCACCACGTTGTATAG 615 0.4829 MSTSARRKVHLNTVSVKLGCGSSCRRPKLSRIFHPKPKPKNSTLQKHKLFNLSSWKYDTTTTTTSTTTPTNTTATTFSPCYYIDSSQFSDSSESNNNKEARRVGGLGRAGGEGVAVEKESDDPYLDFRQSMLQMILENEIYSKEDLRELLNCFLQLNSPYHHGVIVRAFTEIWNGVFSVRSSSSARFHFNRNSNSNNKPFHHVV 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc1357g00001 204 ProSiteProfiles OVATE domain profile. 116 175 IPR006458 -
Stsc1357g00001 204 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 53 178 IPR038933 GO:0045892
Stsc1357g00001 204 MobiDBLite consensus disorder prediction 87 115 - -
Stsc1357g00001 204 Pfam Transcriptional repressor, ovate 120 176 IPR006458 -
Stsc1357g00001 204 NCBIfam uncharacterized plant-specific domain TIGR01568 114 174 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc1357g00001 Stsc-Chr1357 13320 13934 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Stsc1357g00001 Ovate 6.9e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc1357g00001 - - mtr:25499452 197.593