Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc134075g00001 ATGAACGAGATCGAGATGCTCTCGCAGCTTCGCCACCTTCATCTCGTTTCTTTAATCGGTTACTGCAACGAGAGCAACGAGATGATCCTCGTGTACGATTTCATGGACCGTGGAACCCTCCGCGACCATCTCTACAACACCGAAAACCCTTCCATCAAATGGAAGCAGCGGTTACAGATCTGCATCGGTGCAGCGCGTGG 200 0.52 MNEIEMLSQLRHLHLVSLIGYCNESNEMILVYDFMDRGTLRDHLYNTENPSIKWKQRLQICIGAARG 67
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc134075g00001 67 PANTHER OS07G0166700 PROTEIN 2 67 IPR045272 GO:0004714|GO:0006468
Stsc134075g00001 67 Pfam Protein tyrosine and serine/threonine kinase 1 67 IPR001245 GO:0004672|GO:0006468
Stsc134075g00001 67 Gene3D Transferase(Phosphotransferase) domain 1 1 67 - -
Stsc134075g00001 67 ProSiteProfiles Protein kinase domain profile. 1 67 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc134075g00001 67 SUPERFAMILY Protein kinase-like (PK-like) 1 67 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc134075g00001 Stsc-Chr134075 1 325 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc134075g00001 3 67 Receptor kinase-like Gene Family AT3G51550 76.923 5.34e-33 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Stsc134075g00001 PK_Tyr_Ser-Thr 1.7e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc134075g00001 - - gmx:100804042 131.339