Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc133g00009 ATGAATGACCTGATGGGGCTTCTAAGGATTCACATCAAGCGTGGCGTGAATCTGGCGGTTCGTGATGTGAATACGAGTGACCCTTATTGCGTGGTTAGGATGGGGAAACAGAAACTGAAAACACGTGTCATAAAAAAGGATGTTAATCCGGAGTGGAATGAAGAGCTTACACTTCCCGTACAAGATCCCAATGTTCCGTTCACTCTGACTGTGTATGACCATGACACGTTCACGAAAGACGACCCCATGGGGGATGCAGAGTGTGACATAAACCCCTTCATAGAAGCCTTGAAGATGAGCCTTGAAGGCCTCCCAACGGGCACCATAATCAGCCGAATACAGCCTAGCAGGCAAAACTGCCTTGCTGAGGAGAGCCGTATTACTTGCATCGACGGCAAAGTTGTCCAGGACATTGTCCTCAGATTGCGACACGTCGAATGTGGTGAGGTTGAACTCCAATTGGAATGGATAGATATTCCTGGATCTCACGTATGA 495 0.4808 MNDLMGLLRIHIKRGVNLAVRDVNTSDPYCVVRMGKQKLKTRVIKKDVNPEWNEELTLPVQDPNVPFTLTVYDHDTFTKDDPMGDAECDINPFIEALKMSLEGLPTGTIISRIQPSRQNCLAEESRITCIDGKVVQDIVLRLRHVECGEVELQLEWIDIPGSHV 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc133g00009 164 CDD C2_ArfGAP 6 148 - -
Stsc133g00009 164 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Stsc133g00009 164 Gene3D C2 domain 2 163 IPR035892 -
Stsc133g00009 164 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 4 162 IPR044562 -
Stsc133g00009 164 SMART C2_3c 7 102 IPR000008 -
Stsc133g00009 164 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 91 IPR035892 -
Stsc133g00009 164 Pfam C2 domain 6 92 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc133g00009 Stsc-Chr133 37833 38554 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc133g00009 38 161 C2H2 Transcription Factor Family AT1G70790 59.524 5.08e-49 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc133g00009 - - gmx:100799469 267.314