Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc1335g00003 ATGACTGCAAGAATTTTTGAATCTGAGGCAACATACAAATTTCCTATCCAACCTGACAAGCGCTATTGGCTGAGGCTGCATTTCTATCCTTCTAACTATGGAAGCCATGACTCTGCTTATTCATATTTCTCTGTCACAGGAAATTCCATCACACTCCTCAGCAATTTCAGCGCCTCAATCACTTGCCTTGCTCTCTCACAGGCTTACATTGATAGGGAGTATTCCCTTGCAGCTCTGGGTTCTGACACCTTGACTCTCACCTTCAAGCCTGCTGAAAAGATTGGTGCTTTTGCTTTTATCAATGGCATTCAACTGATCCAAATGCCAGATCTTTTTGGTTCTGCTTCTATGGTTGGTTTCGACCAAACATTAGATGCTAAGAGCATGAATTTGCAAACAATGTTCAGATTAAACGTTGGTGGAAAATACATCTCTCCTACACAAGATTCTGGCCTTACAAGGATGTGGTATGATGACTATCCTTACCTCTATGGTGCATCCACTGGAATCACCACAAGTGCTCCAAGTGATGTGAAACTCAACTACCAAAGCATGCCACAGTACACTGCTCCTTCTGATGTCTACCTCACATCAAGATCAATGGGTTCTGACAAGAATCTCAATATGGGCTATAACCTCACATGGATTTTCCAAATTGATCCCAATTCCATGTACTTTGTTAGGATGCATTTCTGTGATTACTATAACAAGGAAGTCAATGACCTTGCTTTCAACATCTTCCTTAACAGCCAGACGGCAGAAACTGGAGTTGATGTTATTGCAATGGCAGGAGGCAGAGGAATCCCATTATTCAAAGACTTTGTGGTCTATTCTAAAGATGGGGATGGTAGTGACCAGCTTTGGGTTGCTCTGCACCCAAATGATATTACAAAGCCCTCTTACCTTGATGCCATACTCAATGGTCTTGAGATTTTCAAGCTCAGTGACACAGACTTGTCTGGCCCTAATCCTACGCCTTCAGACATGCTCAGCAAGTTTGGAAGCGATGGGAAGTTTGCAGATGTCCACAAACATTTGAATAAGACCGTTGTTATTGGTGGCGCCGCGGGTGGCGCAGCTGGTTTTGCCTTGGTGGCTGCCATATGTCTTGCTCTCCATAGGAAGAAGAAATATGCGGGACAACACTCTCGCTCAAGCTGGCTCCCTGTACATGGCAACTCATCAGCAACCACCAAATCCTCCATATCTGCTAGGAGCGTGGGTAGCACCAACCTCACTGCCATGGCTCAAGGTCTTTGCCGCCATTTCTCCTTGCATGAGATGAAGCAAGCAACAAAGAACTTCAATGAGTCCAATGTTATTGGTGTTGGAGGATTCGGAAAGGTGTACAAGGGGACAGTTGATAATGGAACGAAAGTAGCCATCAAGAGATCAAATCCAGAATCTGAGCAAGGAGTTAATGAGTTCCAGACTGAGATTGAGATGCTTTCCAAGCTTAGACATAAGCATTTGGTGTCTCTGATTGGTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACTCTTTCATGGAAGCAAAGGTTGGAAATCTGCATTGGAGCTGCAAGGGGGCTTCACTACCTTCACACTGGAGCTAAGTACACCATCATTCATAGAGATGTCAAGACAACTAACATTCTCTTGGACGAAAACTGGGCTGCAAAGGTTTCGGATTTCGGCTTGTCAAAAACAGGTCCAAACATGAACAATGGACATGTGAGTACTGTGGTGAAGGGAAGTTTCGGCTACTTGGATCCTGAATACTTCAGAAGGCAGCAACTGACCGAGAAATCTGATGTGTACTCATTTGGGGTTGTTCTGTTTGAAGCTCTATGTGCTAGGCCTGTTTTGAATCCTAGTCTTCCAAAGGAACAGGTTAGTCTTGCAGAATGGGCACTTCTATGCAAAAGAAGGGGAACACTAGAGGAGATCATTGATCCTTCCTTAAAGGGAAAGATCAACCCAGAAAGCTTGAAGAAGTTTGTAGACACTGCTGAGAAGTGCTTGTCTGATGTCGGAGTCGAACGCCCTTCCATGAATGATCTGTTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGTCACACATTGGAGAGAGTGGGTTTGAAGAAATAA 2244 0.4051 MTARIFESEATYKFPIQPDKRYWLRLHFYPSNYGSHDSAYSYFSVTGNSITLLSNFSASITCLALSQAYIDREYSLAALGSDTLTLTFKPAEKIGAFAFINGIQLIQMPDLFGSASMVGFDQTLDAKSMNLQTMFRLNVGGKYISPTQDSGLTRMWYDDYPYLYGASTGITTSAPSDVKLNYQSMPQYTAPSDVYLTSRSMGSDKNLNMGYNLTWIFQIDPNSMYFVRMHFCDYYNKEVNDLAFNIFLNSQTAETGVDVIAMAGGRGIPLFKDFVVYSKDGDGSDQLWVALHPNDITKPSYLDAILNGLEIFKLSDTDLSGPNPTPSDMLSKFGSDGKFADVHKHLNKTVVIGGAAGGAAGFALVAAICLALHRKKKYAGQHSRSSWLPVHGNSSATTKSSISARSVGSTNLTAMAQGLCRHFSLHEMKQATKNFNESNVIGVGGFGKVYKGTVDNGTKVAIKRSNPESEQGVNEFQTEIEMLSKLRHKHLVSLIGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLSWKQRLEICIGAARGLHYLHTGAKYTIIHRDVKTTNILLDENWAAKVSDFGLSKTGPNMNNGHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEALCARPVLNPSLPKEQVSLAEWALLCKRRGTLEEIIDPSLKGKINPESLKKFVDTAEKCLSDVGVERPSMNDLLXXXXXXXXXXXXXXXXXXXXXXCHTLERVGLKK 747
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Stsc1335g00003 747 Gene3D Transferase(Phosphotransferase) domain 1 533 725 - -
Stsc1335g00003 747 Pfam Malectin-like domain 2 313 IPR024788 -
Stsc1335g00003 747 Gene3D - 1 109 - -
Stsc1335g00003 747 Gene3D - 129 315 - -
Stsc1335g00003 747 Coils Coil 710 714 - -
Stsc1335g00003 747 Pfam Protein kinase domain 436 714 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc1335g00003 747 Gene3D Phosphorylase Kinase; domain 1 407 504 - -
Stsc1335g00003 747 PANTHER OS07G0166700 PROTEIN 420 714 IPR045272 GO:0004714|GO:0006468
Stsc1335g00003 747 ProSiteProfiles Protein kinase domain profile. 435 741 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc1335g00003 747 FunFam FERONIA receptor-like kinase 1 109 - -
Stsc1335g00003 747 SUPERFAMILY Protein kinase-like (PK-like) 404 715 IPR011009 -
Stsc1335g00003 747 FunFam receptor-like protein kinase FERONIA 397 503 - -
Stsc1335g00003 747 FunFam FERONIA receptor-like kinase 129 315 - -
Stsc1335g00003 747 ProSitePatterns Serine/Threonine protein kinases active-site signature. 567 579 IPR008271 GO:0004672|GO:0006468
Stsc1335g00003 747 FunFam Receptor-like protein kinase FERONIA 532 722 - -
Stsc1335g00003 747 SMART serkin_6 435 719 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc1335g00003 747 ProSitePatterns Protein kinases ATP-binding region signature. 441 463 IPR017441 GO:0005524
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Stsc1335g00003 Stsc-Chr1335 6032 8638 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc1335g00003 1 714 Receptor kinase-like Gene Family AT3G51550 51.984 0.0 711
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Stsc1335g00003 Malectin_like 5.2e-33 CL0202
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc1335g00003 - - gmx:100815737 1000.73