Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc131381g00001 AGTAGGATTATCATAACAACTAGAGATGAGCATTTGCTAATTGCTCACAATGTGGAAACTAACTACAAGGTGAAGGAGTTAAGCCATGACCATGCTCTTGAACTCTTTTCTTGGTTTGCTTTCAAAAAGCCATGTCCTGCATCAGATTATGAGGGATTGTCCTCGCAAATATTAAACTATGCCAAGGGCTTGCCATTGGCACTGACAGTTTTGGGGGCCTACCTCTGTGGTAGAGGGAAAGCCGAGTGGATAAGTGCGCTAGGTAAAGTGAAAAAAATTCCAAATAAACAGATCCATGCAATACTTAAAATCAGCTTTGATGGGTTAGAAGAGCATGAAAAGGCCATTTTTCTGGATATTGCATGTTTCTTCAAGGGAGAGGACAAAGAATATGTGAAAATGATACTTGATGCTTGTGACCTGCACTGGGATAATGGCTTTGGA 444 0.4077 SRIIITTRDEHLLIAHNVETNYKVKELSHDHALELFSWFAFKKPCPASDYEGLSSQILNYAKGLPLALTVLGAYLCGRGKAEWISALGKVKKIPNKQIHAILKISFDGLEEHEKAIFLDIACFFKGEDKEYVKMILDACDLHWDNGFG 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc131381g00001 148 Gene3D - 26 110 IPR042197 -
Stsc131381g00001 148 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 120 IPR027417 -
Stsc131381g00001 148 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 137 IPR044974 GO:0006952
Stsc131381g00001 148 Pfam NB-ARC domain 1 93 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc131381g00001 Stsc-Chr131381 22 467 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc131381g00001 1 139 WRKY Transcription Factor Family AT5G45050 37.857 4.73e-22 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc131381g00001 - - ahf:112749316 281.952