Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc1312g00001 ATGGATTCAACAATCCTAACTAACCATCTAAACACTACTACCATTGGAATCCTCTTTGTCATTACCACCCTAATCTATGTTCTTTTCTTTAGTTCCTTCAAAGTTGGTCATCATCACAATAAGCATAAAGAACCTCCCATGGTGGATGGTGCATGGCCTATACTCGGTCACCTTCCACTACTTTTGCGCGGTTCTATTTCCTCACAACCAGTTCACACAGCTTTTGCTGCTATAGCCGACGAATACGGACCCCTTTTCGCGATGAAGCTTGGTTCTAGAAAGATGGTAGTGTTAAGCAACTCAGAAATTGCCAAAGAATGCTTCACAAAAAATGATTCCTTTGTTTCTTCTCGTCCTATTTTCGTCTCGCCCGAAATTCTTGGGTACAATGGAGCCATGTTTTCTTTCATGCCATACGGTTCATATTGGCGTGAACTCCGCAAGATCATGAACTTAGAGCTTCTCTCGAACCAAAGAGTAGAGCAACTAAGTCATGTTCGTGTCTCCGAAGTTCAAGCTTCCATGAAAGAGCTTCTTAATTTTTGGTCCACTCAGAAGAATGAGTCTGGCTATGTGTTTCTGGACATAAAGCAATGGTTCAAAGAATTGATATTTAATATGGTACTTAGAATGATTGTTGGAAAGCGAGTTTTTGGCACCATGGATTTGGAGAGCGAGGTTAAGGCAAAGAAGTGTTTGAAAGTCTTTACTGACTACATGCATGCTCTGGAGGAATTCACAGTGGGAGATGCTATTCCTTTTCTAAGGTGGTTAGATTTGGGGGGTCGTGAAAAAGTCATGAGAGAAGTTTCAAAAGAAATGGACAAGATTTTGAGTGAATGGTTAGATGATCATAGAAAGAAAATGGATTATGAGGATGGAAAGGAAGCAACAAGTTATGAACGAGACTTCATTGATGTTATGCTTTCAAGTCTCTCTCATGGAAAGATCGATGCATTTGATGCTGATACCATATGCAAAGCCACCACATTGAGTGTTATTGTGGGAGCTATTGATACCTCACCGACTGCTCTTACATGGGCAATGTGTCTCTTATTAAGAAATCCAGGTGTGCTAGGAAAAGCAAAAGAAGAACTTGACAAGAAAATTGGGAAAGAAAGGTGCATAAATGAATCAGATATAAACAAATTAGTATATATTCAAGCCATAGTCAAAGAGACATTAAGATTGTATCCACCAGTTCCTCTTTCAGTTCGTGAATTTGCAGAAAATACCAATTTAGGTGGATATGATATAGAAAGAGGTACTATACTATTCACAAATATTTGGAAAATCAACACTGATTCTAGTGTTTGGTCAGATTGCTTAGAATTCCAGCCAGAAAAATTTCTGACAACACATAAAGATGTTGATTTTAGGGGTCAACATTTTGATTTGTTACCATTTGGAAGTGGTAGAAGAATCTGTCCTGGAATTTCCTTTGGAGTTCAAATAATCCACTTCATTCTGGCTAGCTTCTTGCATTCTTTTGAAATCTCTTCTATGGAAGATGTTGATATGACTGGAACTCAAGTAGGGACTTATGAAAAAGCTACTCCACTTAAGGTCTACCCTCCGCCGTTCCAAGCTTTGGTTAACCTCTTAGAAGCCAAGTTCGACCTCTTTGGAGCCAAGACGAACACTTACATCCAAGGAGGACCTCTTCGCCAAGAGTTAAAGCATCGAGACGAGTTAACAATGGAGTCGCACCGAGCAGCACTTAACCGCTTGCCTTGGTGA 1740 0.3983 MDSTILTNHLNTTTIGILFVITTLIYVLFFSSFKVGHHHNKHKEPPMVDGAWPILGHLPLLLRGSISSQPVHTAFAAIADEYGPLFAMKLGSRKMVVLSNSEIAKECFTKNDSFVSSRPIFVSPEILGYNGAMFSFMPYGSYWRELRKIMNLELLSNQRVEQLSHVRVSEVQASMKELLNFWSTQKNESGYVFLDIKQWFKELIFNMVLRMIVGKRVFGTMDLESEVKAKKCLKVFTDYMHALEEFTVGDAIPFLRWLDLGGREKVMREVSKEMDKILSEWLDDHRKKMDYEDGKEATSYERDFIDVMLSSLSHGKIDAFDADTICKATTLSVIVGAIDTSPTALTWAMCLLLRNPGVLGKAKEELDKKIGKERCINESDINKLVYIQAIVKETLRLYPPVPLSVREFAENTNLGGYDIERGTILFTNIWKINTDSSVWSDCLEFQPEKFLTTHKDVDFRGQHFDLLPFGSGRRICPGISFGVQIIHFILASFLHSFEISSMEDVDMTGTQVGTYEKATPLKVYPPPFQALVNLLEAKFDLFGAKTNTYIQGGPLRQELKHRDELTMESHRAALNRLPW 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc1312g00001 579 PRINTS P450 superfamily signature 336 353 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc1312g00001 579 PRINTS P450 superfamily signature 389 400 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc1312g00001 579 PRINTS P450 superfamily signature 467 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc1312g00001 579 FunFam Cytochrome P450 82C4 36 525 - -
Stsc1312g00001 579 PANTHER CYTOCHROME P450 82C3-RELATED 24 524 - -
Stsc1312g00001 579 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 469 478 IPR017972 GO:0005506|GO:0016705
Stsc1312g00001 579 PRINTS E-class P450 group I signature 476 499 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc1312g00001 579 PRINTS E-class P450 group I signature 466 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc1312g00001 579 PRINTS E-class P450 group I signature 103 124 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc1312g00001 579 PRINTS E-class P450 group I signature 345 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc1312g00001 579 PRINTS E-class P450 group I signature 79 98 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc1312g00001 579 PRINTS E-class P450 group I signature 428 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc1312g00001 579 PRINTS E-class P450 group I signature 388 406 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc1312g00001 579 Gene3D Cytochrome P450 33 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc1312g00001 579 Pfam Cytochrome P450 49 507 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc1312g00001 579 SUPERFAMILY Cytochrome P450 51 524 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc1312g00001 Stsc-Chr1312 7032 10396 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc1312g00001 18 527 Cytochrome P450 AT4G31970 43.822 5.53e-148 435
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc1312g00001 - - adu:107490967 623.624