Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc130573g00001 ATGGAAATTCCATACTGCATTGTCAAGGGAAAGGCTCGCCTTGGATCGATTGTTCACAAGAAAACTGCATCTGTTTTGTGCTTGACCAGTGTCAAGAACGAAGACAAATTAGAGTTCAGCAGGGTCTTAGAGGCTATCAAGGCTAACTTCAATGACAAGTTCGACGAGTACAGAAAGAAATGGGGTGGCGGCATCATGGGATCTAAATCCCAAGCCAAAACTAAGGCCAAGGAGAGGCTTCTTGCTAAGGAGGCTGCTCAAAGGATGTCTTAG 273 0.4542 MEIPYCIVKGKARLGSIVHKKTASVLCLTSVKNEDKLEFSRVLEAIKANFNDKFDEYRKKWGGGIMGSKSQAKTKAKERLLAKEAAQRMS 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc130573g00001 90 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 1 37 IPR004038 -
Stsc130573g00001 90 PRINTS Ribosomal protein L7A family signature 17 41 IPR001921 -
Stsc130573g00001 90 PRINTS Ribosomal protein L7A family signature 49 69 IPR001921 -
Stsc130573g00001 90 Gene3D - 1 84 IPR029064 -
Stsc130573g00001 90 SUPERFAMILY L30e-like 1 51 IPR029064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc130573g00001 Stsc-Chr130573 1 576 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc130573g00001 1 90 Cytoplasmic Ribosomal Protein Gene Family AT2G47610 84.444 5.16e-55 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc130573g00001 K02936 - csv:101213286 167.548