Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc130484g00001 ATGAAGAGATGGTATCTTCAACCCGATGATACTACAATCTATTATGATCCAAAGAGAGCACCAATTGCAGCAACTTTGCATTTCTTGACTGCACTTATGCTGTACAGTTACTTGATTCCAATTTCTTTGTATGTCTCCATTGAAATTGTCAAAGTTCTTCAAAGCATTTTCGTCAACCCTGACTTGAACATGTATTATGAGGAAATTGACCAGTCAGCTCATGCTAGAACATTGAATTTGAATGAAGAACTAGGCCAAGTTGGCACGATACCTTTAGACAAAACAAGAACCTTGACTTGCAATTCCATGGAGTTTATCAAGTGTTCTATTGCTGGGGTCACCTATGGATGGGGTGTTACTGAAGTTGAGAGAGCTATAGCTGGGAGAAAAGGTCAAGAGTTGACTGAAGATGACAATGTTGCAAATTCTGAAGCAAAACCATCAATTAAAG 451 0.3858 MKRWYLQPDDTTIYYDPKRAPIAATLHFLTALMLYSYLIPISLYVSIEIVKVLQSIFVNPDLNMYYEEIDQSAHARTLNLNEELGQVGTIPLDKTRTLTCNSMEFIKCSIAGVTYGWGVTEVERAIAGRKGQELTEDDNVANSEAKPSIK 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc130484g00001 150 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 3 139 - -
Stsc130484g00001 150 SUPERFAMILY Calcium ATPase, transmembrane domain M 27 85 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc130484g00001 Stsc-Chr130484 18 468 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc130484g00001 1 150 Primary Pumps ATPases AT1G26130 70.130 8.66e-69 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc130484g00001 K01530 - gmx:100797039 236.113