Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc12g00016 ATGGAGTCTCTACGCCAGAGAGCCACGCTCGTCAAGGAATCCCTCCACAAGAGCCAGATCATCACCGACAGCATGGTCTCCATCCTCGGCTCCTTCGACCACCGCCTCTCCGCCCTCGAAACCGCCATGCGTCCCACTCAGATTAAAACACATTCAATTCGAAGTGCACATGATAACATTGACAAGACTCTTAAGGCAGCAGACGTTTTTCTGGTGCAATTTGAGCAGACTCGAAAGGCGGAGGCTAAAATAATCCGAGGCCCTCAAGAGGATCTGGAAAACTATATAGAAGCAGTTGAACAATTGAGAACCAATTTGAAATTCTTCAACAGCAAAAAGAGTTTCAAAGGTAGTGAGGTTATCATCAACCATACCAACAACTTGCTTGCCAAAGCTATCACAAAGCTTGAAGACGAGTTCAGACTTCTCTTAACAAATTACAGTAAACCGGTGGAACCTGACCGCCTATTTGACTGCATACCACACCGTCGACGATCCTCGACTTCTGGAAGGCAAAGTGATGCTAGCAAAGCTGATCTGGAATCTGAGAAGCAACCAGAACCGGCTGTTTACACGCTTCCAACCCTCATTCCACCCAGAGTTATTCCTTTGCTACATGATTTAGCACAACAAATGGTTGATGCTGGCCACCAACAACAGCTCTTTCGACTCTACAGAGACACTCGTGCCCCTGTCGTGGAACAGAGTCTTAGGAAGTTAGGTGTAGAGAGGCTGAGTAAAGATGACGTTCAAAAAATGCAGTGGGAGGTTTTGGAGTCTAAGATTGGGAACTGGACTCATTTCATGAGGATTGCTGTTAAATTGCTGCTGACTGTGGAAAAGCAAATCTGTGATCAAATATTTGAAGGTTTTGATACTATGAGAACTCAATGCTTTGCTGAAGTCATTGCTAGCAGTTTCATTATGCTCCTTAGTTTTGGAGAGGCTGTTGCCAAAAGCAAGAGGTCATCTGAAAAACTATTTGTTACTCTAGACATGTATGAGACAATGAGAGAACTTCATCCTGAGATGGAGACAATTTTTGAAGGTAAAGCCTGCACGGAATTGCGCGAAGCTTCTATGTCCTTGACAAAGAGACTAGGCCAGACAGCCATGGAAACCTTCTGTGACTTTGAGGAACTAATTGAAAATGATGCTACTAAAACTGCTGTGCTAGATGGAACTGTCCATCCACTAACTAGCTATGTGATCAATTACGTTAAGTTTCTCTTTGATTATCAATCAACACTGAAACAAATTTTTCATGAGTTTGATCCCAATGACCCAGAAAGTCAGTTAGCAAACCTTACAACAAGGATTATGCAGGCTCTCCAGAATAATCTTGATGGAAAATCAAAACAATATAAAGATCCAGCATTATCCCAACTGTTTCTTATGAATAATATCCATTACATAGTGAGATCAGTGAGAAGGTCAGATGCAAAGGATATGTTGGGCGAGGACTGGGTGCAAATACATAGAAGAGTTGTGCAACAGCATGCAAATCAGTATAAGAGGATCTCATGGGCAAAGATAGCTCAGTGCCTCACTGTGCAATCACCAAATTCATCAGGTGGGGCTGACAGCACTGCTGGAATTTCAAGAAACATGATTAAAGATAGGTTCAAGAGTTTCAACTCTCAAATTGAGGAGCTTTATTGGAGACAATCTCAATGGACAGTTCCTGACAGTGAGTTGCGGGAATCTCTCAAATTGGCTATCATCGAAGTACTTTTACCTGCTTATAGATCTTTCCTCAAACGTTTTGGGCCCATGCTTGAGAATGGGAAAAATCCTACGAAGTACATAAGATACACACCAGAACAAATTGAAGAAATGCTGAATGGCTTTTTCGAGAGCAAGTCGTGGAATGATCAGAAGCGGTGA 1887 0.4271 MESLRQRATLVKESLHKSQIITDSMVSILGSFDHRLSALETAMRPTQIKTHSIRSAHDNIDKTLKAADVFLVQFEQTRKAEAKIIRGPQEDLENYIEAVEQLRTNLKFFNSKKSFKGSEVIINHTNNLLAKAITKLEDEFRLLLTNYSKPVEPDRLFDCIPHRRRSSTSGRQSDASKADLESEKQPEPAVYTLPTLIPPRVIPLLHDLAQQMVDAGHQQQLFRLYRDTRAPVVEQSLRKLGVERLSKDDVQKMQWEVLESKIGNWTHFMRIAVKLLLTVEKQICDQIFEGFDTMRTQCFAEVIASSFIMLLSFGEAVAKSKRSSEKLFVTLDMYETMRELHPEMETIFEGKACTELREASMSLTKRLGQTAMETFCDFEELIENDATKTAVLDGTVHPLTSYVINYVKFLFDYQSTLKQIFHEFDPNDPESQLANLTTRIMQALQNNLDGKSKQYKDPALSQLFLMNNIHYIVRSVRRSDAKDMLGEDWVQIHRRVVQQHANQYKRISWAKIAQCLTVQSPNSSGGADSTAGISRNMIKDRFKSFNSQIEELYWRQSQWTVPDSELRESLKLAIIEVLLPAYRSFLKRFGPMLENGKNPTKYIRYTPEQIEEMLNGFFESKSWNDQKR 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc12g00016 628 Gene3D Exocyst complex component Exo70 69 628 - -
Stsc12g00016 628 Coils Coil 92 112 - -
Stsc12g00016 628 MobiDBLite consensus disorder prediction 162 184 - -
Stsc12g00016 628 PANTHER EXOCYST COMPLEX PROTEIN EXO70 51 619 IPR004140 GO:0000145|GO:0006887
Stsc12g00016 628 MobiDBLite consensus disorder prediction 162 186 - -
Stsc12g00016 628 Pfam Exo70 exocyst complex subunit 264 615 IPR046364 GO:0000145|GO:0005546|GO:0006887
Stsc12g00016 628 SUPERFAMILY Cullin repeat-like 74 619 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc12g00016 Stsc-Chr12 112183 116038 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc12g00016 1 628 EXO70 exocyst subunit family AT5G52340 70.382 0.0 940
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc12g00016 K07195 - gmx:100779774 973.385