Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc12g00013 ATGGCAGATTACAAGGAACAATATGGCCCTTCAATTCCTCCACCCTACAATCCAAACCGTTCATCAAACTGCCTTTGCTGCTTCTTCAAGGTTCTCATAACACTCATAATCCTATTGGGCCTTGCATGCCTTATTGCCTATTTTATAATCCGTCCAAGACCCTTCACATTCCATGTCACCAATGCAAACCTCACACAATTCGATTACAATACCAACAAAAAAACCTTAGACTACAACCTTGTACTAAATTTCACTGCCAGTAACCCTAACAGAATGCTTAGCCTTTACTATGATTTTGTTGAGGCCAATGCATACTACCAAGAATTAAGGTTTTCTCTACTTGATCTCATCAAAAGGGAGGATAATTTGCTTAGACAATCCCCAAAGAGTACGATTCAAATGAGTGGTGTGTTCAAGGGTCAACAACTTTTGTTTCTTGATGAAAGTCAACTCTCTGAGTTTGACCGAGAGGAGAGTCATGGGGTGTTCAATATTTTTGTGAGACTTGATTTGAATATTAGGTTGAAGCTTGGTAGACTAACTGTTGGTAAATCAAAGTCTACTACTGCTAAGTGTCCAATTAAGGTTGCTTTGAGTGGTAATGATGGGAAAATAGTGTCACCATTTGAGACCATTGAATGTAATGTCAAGGTGTGA 657 0.3896 MADYKEQYGPSIPPPYNPNRSSNCLCCFFKVLITLIILLGLACLIAYFIIRPRPFTFHVTNANLTQFDYNTNKKTLDYNLVLNFTASNPNRMLSLYYDFVEANAYYQELRFSLLDLIKREDNLLRQSPKSTIQMSGVFKGQQLLFLDESQLSEFDREESHGVFNIFVRLDLNIRLKLGRLTVGKSKSTTAKCPIKVALSGNDGKIVSPFETIECNVKV 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc12g00013 218 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 16 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc12g00013 Stsc-Chr12 89251 89907 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc12g00013 49 199 SNARE and Associated Proteins AT1G32270 28.477 1.12e-13 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc12g00013 - - gmx:100793725 185.652