Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc12g00011 ATGAAAAATAAAAACAAACAAGAACTTCATCAATCGAATACCACCGTCAACCACTGCGAGCGCCGGCCAAACCGCACCACAAGATGTTGTTGCTGCCTCTTCAGCATCATATGGTACGTCCTTATCTCAATCATCATCCTCGTACTTCTCGTGATCCTTGTACTCTACATCATCCTCCAACCACGTTCCTTCACCTTCCATGTCACTCAAGCCAACCTCACCACATTCAACTACCTTAGCAACACCACCATGTTACGCTACAACCTCGTCCTCAACTTCACCCTCCACAACCCCAACAAGAAACTCGGCATCTACTTCGACGAAGCACGTGGCCACGCGCTCTATCAGGAGAAAGAGTTTTCCACCACCACTCCCTTGACGGCGCCATGGTTCTCTTACCTTCTTTCTACAAAGGAAAGGGTTCTGATGAGCGTTGTCTTCTCTGGGAACAAATTGGTGGTGCTTGATGTTGATGATTTTGAAGGGGACATGAACAGAGGTGTTTTTGGAATTGATGTGAAGATTTATTTTTTGATAAGGTTTAGAATTGGTGATTTTATAGGTAATAATTTAATCAATTATGCTAGGGCTAAGTGTGGGATTAAGGTTCCTTTCAATTCTAGTACTAAAAATGGAACAACAATGGTGTTTGAGCCTACAAAGTGTGAGGTTGATTTATGA 681 0.4317 MKNKNKQELHQSNTTVNHCERRPNRTTRCCCCLFSIIWYVLISIIILVLLVILVLYIILQPRSFTFHVTQANLTTFNYLSNTTMLRYNLVLNFTLHNPNKKLGIYFDEARGHALYQEKEFSTTTPLTAPWFSYLLSTKERVLMSVVFSGNKLVVLDVDDFEGDMNRGVFGIDVKIYFLIRFRIGDFIGNNLINYARAKCGIKVPFNSSTKNGTTMVFEPTKCEVDL 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc12g00011 226 PANTHER OS05G0367900 PROTEIN 28 208 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc12g00011 Stsc-Chr12 85638 86318 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc12g00011 66 213 SNARE and Associated Proteins AT1G32270 29.221 1.29e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc12g00011 - - adu:107476359 319.316