Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc129341g00001 GGTTTAACTGCCCTAACTATGGCGGAATATTTCAGAGATGTTAATGAACAAGACGTGCTTCTATTTATCGACAATATCTTCCGATTCGTCCAAGCGGGATCCGAAGTGTCAGCCTTATTGGGTCGAATGCCTTCCGCTGTAGGTTATCAACCGACCCTTAGTACCGAAATGGGTTCTTTACAAGAAAGAATTACTTCTACCAAAGAAGGGTCTATAACTTCTATTCAAGCAGTTTATGTACCCGCAGACGATTTGACCGACCCTGCCCCTGCTACGACATTTGCACATTTGGATGCTACGACCGTACTATCAAGAGGATTGGCTGCCAAAGGTATCTATCCAGCTGTAGATCCTTTAGATTCAACGTCAACTATGCTCCAACCTCGGATTGTTGGTGAAGAACATTATGAAACTGCGCAAAGAGTTAAACAAACTTTACAGCGTTACAAAGAACTTCAGGACATTATAGCTATCCTTGGGTTGGACGAATTATCCGAAGAGGATCGCTTAACTGTAGCAAGAGCACGGAAAATTGAGCGTTTCTTATCACAGCCTTTTTTCGTAGCAGAAGTATTTACCGGTTCGCCAGGAAAATATGTAGGTCTAGCAGAAACAATTAGAGGGTTTAAATTGATTCTTTCTGGAGAATTAGACGGTCTTCCCGAGCAAGCCTTTTATTTGGTGGGTAATATCGATGAAGCAACTGCGAAG 711 0.4262 GLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGELDGLPEQAFYLVGNIDEATAK 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc129341g00001 237 Gene3D - 126 237 IPR024034 -
Stsc129341g00001 237 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 2 123 IPR000194 GO:0005524
Stsc129341g00001 237 Gene3D - 1 123 IPR027417 -
Stsc129341g00001 237 PANTHER ATP SYNTHASE 1 237 - -
Stsc129341g00001 237 SUPERFAMILY C-terminal domain of alpha and beta subunits of F1 ATP synthase 126 237 - -
Stsc129341g00001 237 ProSitePatterns ATP synthase alpha and beta subunits signature. 114 123 IPR020003 GO:0005524
Stsc129341g00001 237 FunFam ATP synthase subunit beta 126 237 - -
Stsc129341g00001 237 CDD ATP-synt_F1_beta_C 130 237 - -
Stsc129341g00001 237 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 128 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc129341g00001 Stsc-Chr129341 10 722 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc129341g00001 3 187 Primary Pumps ATPases(2) AT1G78900 30.348 1.04e-19 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc129341g00001 K02112 - qsa:O6P43_035109 458.759