Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc12912g00001 ATGGTAGAGTCTGGGGCCTTGGAGGCACTAACTAAATATCTTTCGCTAGGTCCTCAAGATGCAACTGAAGAAGCTGCTACAGATCTGTTAGGAATTCTGTTTAGCAGTGCTGAAATACGGAGACATGAATCTGCATTTGGTGCTGTTACTCAACTTGTGGCTGTCCTGCGTTTGGGAGGAAGAGCTGCAAGGCGTAGTGCTGCAAAAGCCTTAGAAAGTTTATTCTCTGCTGACCATATTAGAAATGCAGATACTGCTCGACAAGCTGTTAAACCCTTGGTAGAGATTCTTAATACAGG 299 0.4448 MVESGALEALTKYLSLGPQDATEEAATDLLGILFSSAEIRRHESAFGAVTQLVAVLRLGGRAARRSAAKALESLFSADHIRNADTARQAVKPLVEILNTG 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc12912g00001 100 Gene3D - 1 100 IPR011989 -
Stsc12912g00001 100 SUPERFAMILY ARM repeat 1 100 IPR016024 -
Stsc12912g00001 100 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 1 100 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc12912g00001 Stsc-Chr12912 1 328 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc12912g00001 1 100 U-box Gene Family AT1G71020 36.190 9.42e-06 40.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc12912g00001 - - jre:109010170 156.762