Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc126g00011 ATGGTGAAGAACGAATGGGGCTTTTCCATGTACCCATTGGTCCCTGGGCATGAAGTTGTTGGTGTTGTGACAGAAGTGGGAAGCAAGGTTCAAAAGTATAAGATTGGGGACAGAGTAGGGGTGGGATGCTTGGTTGAATCCTGCAGAAATTGCCAAAACTGCAATGATAATCTTGAGAATTATTGCTCCTCATATACTCTAACATATGGTGCAAAATCCCGTGATGGAAGCATCACATATGGAGGCTACTCTGATTCAATGGTTGTTGATGAACACTTTGTGGTTCGAATTCCTGATGAGTTGCCTCTTGATGCTGCTGCTCCTTTGCTATGCGCTGGGATCACAGTGTATAGCCCCCTCAGATATTTTGGACTAGACAAACCTGGCTTGCACGTTGGTGTAGTTGGTCTTGGCGGGTTAGGACACGTGGCAGTCAAATTTGCCAAAGCTTTTGGTGCTAAAGTCACTGTTATCAGTACCTCACCCCACAAAAAGGAGGAAGCAATTCAACACTTGGGAGCTGATTCATTTTTGTTAAGTCGCGACCAAGATCAGATGCAGGATGCAAAGGAAAGCTTGGATGGTATCATAGACACAATTTCTGCTGTTCATTCTCTGGTGCCTCTCATTGGTTTATTGAAGTCTCATGGCAAACTTGTAATGGTTGGAGCACCTGATAAGCCTCTAGAGCTGCCAGTCATTCCTTTACTCATGGGGAGAAAGCTAATAGCTGGTAGTGCCATTGGAGGGTTAAATGAGACTCAGGAGATGATTGATTTTGCTGCAAAACACAATGTGAGACCTGATATCGAAGTCATTCCTATTGATTATGTCAACACTGCAATGGAGCGCCTCCTTAAATCAGATGTCAAGTATCGCTTCGTCATTGACATTGGAAACACTCTGAAACAAACCTCTTAA 921 0.4397 MVKNEWGFSMYPLVPGHEVVGVVTEVGSKVQKYKIGDRVGVGCLVESCRNCQNCNDNLENYCSSYTLTYGAKSRDGSITYGGYSDSMVVDEHFVVRIPDELPLDAAAPLLCAGITVYSPLRYFGLDKPGLHVGVVGLGGLGHVAVKFAKAFGAKVTVISTSPHKKEEAIQHLGADSFLLSRDQDQMQDAKESLDGIIDTISAVHSLVPLIGLLKSHGKLVMVGAPDKPLELPVIPLLMGRKLIAGSAIGGLNETQEMIDFAAKHNVRPDIEVIPIDYVNTAMERLLKSDVKYRFVIDIGNTLKQTS 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc126g00011 306 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 101 266 IPR036291 -
Stsc126g00011 306 CDD CAD1 1 297 IPR047109 GO:0016616
Stsc126g00011 306 Gene3D - 1 298 - -
Stsc126g00011 306 FunFam Putative cinnamyl alcohol dehydrogenase 6 269 298 - -
Stsc126g00011 306 SMART PKS_ER_names_mod 3 296 IPR020843 GO:0016491
Stsc126g00011 306 Gene3D - 112 268 - -
Stsc126g00011 306 PANTHER ALDEHYDE REDUCTASE 1 301 IPR047109 GO:0016616
Stsc126g00011 306 Pfam Alcohol dehydrogenase GroES-like domain 7 96 IPR013154 -
Stsc126g00011 306 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 16 30 IPR002328 GO:0008270|GO:0016491
Stsc126g00011 306 SUPERFAMILY GroES-like 2 129 IPR011032 -
Stsc126g00011 306 FunFam Cinnamyl alcohol dehydrogenase 112 268 - -
Stsc126g00011 306 Pfam Zinc-binding dehydrogenase 139 262 IPR013149 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc126g00011 Stsc-Chr126 65866 67477 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc126g00011 1 303 Monolignol Biosynthesis Gene Families AT4G37990 70.627 5.61e-145 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc126g00011 K23232 - gmx:100816901 509.605