Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc126542g00001 ATGGGGGACATCATGAAGACCTCTTCTTTTGCACTGACTGAGGCAAAGTACGTTGCTGGTGACAACATCAAGCATGTTGTGCTCGAGAATGTTCGAGAGGCCTCCCTCAAGGTCCGGTCCCGGCAGGAGAATGTTGCTGGTGTTAAGCTTCCCAAGTTCGAGTACACCAATGACGGCGAGGTTAACAAGAATGACCTCACTGGATTGGCCCGAGGTGGCCAGCAGGTGCAGCAGTGCCGAGCTGCTTACATCAAGGCAATTGAGGTCCTTGTGGAGCTTGCCTCTCTTCAGACATCCTTCCTTACACTAGACGAGGCGATCAAGACCACGAACCGGAGGGTTAATGCTCTTGAGAATGTGGTGAAGCCTAGGTTGGAGAATACCATTAGTTACATTAAGGGAGAGTTGGATGAGCTAGAAAGGGAGGATTTTTTTAGGTTGAAGAAGATCCAGGGATATAAGAAGAGGGAAATTGAGAAGCAGATGCAATCTGCCAAGTTGTTCGTTGAGGAACAGGTCGCTGAGAAGCTTGCGTTGCAGAGAGGTATTTCGCTGAATAATGCTCAAAACATTTTGTCTGCAACGGCCCAGAAAGACGAGGATATCATTTTCTGA 615 0.4846 MGDIMKTSSFALTEAKYVAGDNIKHVVLENVREASLKVRSRQENVAGVKLPKFEYTNDGEVNKNDLTGLARGGQQVQQCRAAYIKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPRLENTISYIKGELDELEREDFFRLKKIQGYKKREIEKQMQSAKLFVEEQVAEKLALQRGISLNNAQNILSATAQKDEDIIF 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc126542g00001 204 Gene3D - 1 164 - -
Stsc126542g00001 204 Pfam ATP synthase subunit D 1 151 IPR002699 GO:0046961
Stsc126542g00001 204 NCBIfam V-type ATP synthase subunit D 2 155 IPR002699 GO:0046961
Stsc126542g00001 204 Coils Coil 122 142 - -
Stsc126542g00001 204 PANTHER V-TYPE ATP SYNTHASE SUBUNIT D 1 204 IPR002699 GO:0046961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc126542g00001 Stsc-Chr126542 1 1144 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc126542g00001 1 204 Primary Pumps ATPases(2) AT3G58730 79.412 1.02e-118 336
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc126542g00001 K02149 - tcc:18612121 343.199