Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc1263g00001 ACAGAGCTGGAGCCGCTACAAGATTCCAAGCAGTTGAAGGCTCCGCCAGTCGCCGCCGCCAACGGTCAGATCCGTTACCGATCGCCGTCCTCAGCCGAGCTCTTCGACGGACAGTCAAGCGGGAACTCACCTCCGTCACACGCCGCCGACCACAACTCGCCGGAATTCGAGCCCTCCGGCAAAATGCTGAAGCGCCCCGGCCGCCAGGAGTCCCTCGCCGACAAGATCTACCGGTTCCGAGCAACGCTGCTCGTGGTGTCGATCCCGCTTGTCCTCATCACCTTCGTCCTCTACATGATGCCTTCTTCTTCGTCCAATGAGTCCGTCGCAGAGTTCACCCTCGTCAACCGGAAGATGTCGCCGGAGAAGAATCCCGGCGGATCCTATGCCGTGATCTTTGACGCTGGCAGCTCCGGCAGCCGCGTCCACGTCTTCCACTTCGATCAAAACATGGATCTCATTAAACCCGGTTTGAGCGCCTACGCTCAGAATCCGCAGCAGGCAGCGGAATCTCTGGTCTCGCTTTTGGATAAGGCGGAGAGTGTAGTTCCAAGGGAATTGCGATCCAAAACACCAGTGCGCGTTGGGGCGACTGCTGGTTTGAGGGCTTTGGAAGGAGATGCATCTGATAGGATCTTGCAAGCGGTGAGGGACTTGCTTAAGCAAAGAAGCAGCCTGAGATCCGAGGCTGATGCGGTTACAGTGCTGGATGGAAATCAAGAAGGCGCTTTTCAATGGGTGACTATCAACTATTTATTGGGAAATGTAGGAAAAGATTATTCAAAGACTGTTGGTGTAGTTGATCTTGGGGGTGGATCTGTTCAAATGGCTTATGCCATCTCAGAGACAGATGCTGCCGTGGCTCCAAAAGTATCGGAAGAAGAGGACCCATATGTTAAGGAGATGTTCTTAAGGGGAAGGAAATACTACCTATATGTTCACAGTTACTTGCACTATGGTTTACTAGCAGCCCGTGCAGAGATTTTAAAGGTTTCTGATGATGCAGAAAACCCTTGCATCTTATCTGGCTTTGATGGATCATATAATTATGGGGGAAAGTCATTCAGGGCCTCATCTTCCCCTTCCGGTGCAAGCCTAAATGAATGCAAAGGCATAGCTCTTAAGGCTCTCAAAGTTAACGAGTCAACATGTACTCATATGAAGTGCACTTTTGGTGGGATATGGAATGGTGGAGGTGGGGATGGACAAAAGAACCTTTTTGTTGCCTCATTTTTCTTTGATCGCGCTGCTGAGGCTGGTATTGCTGACTCAAACTCACCTGTTGCAATAGTTCGCCCAGCAGATTTTGAGGATGCTGCTAAGAAAGCTTGTCAAACAAAACTTGAGGATGCCAAATCCAGTTATCCACATACTGAGGATGGGAACCTTCCATACATTTGCATGGATCTTGTATACCAATATACATTGCTTGTTGATGGATTTGGTATCTATCCATGGCAAGAGATTACATTGGTGAAGAAAGTAAAATACAATGATGCCCTTGTTGAGGCAGCATGGCCCCTAGGCAGTGCCATAGAAGCTGTATCATCCACGTAA 1557 0.4971 TELEPLQDSKQLKAPPVAAANGQIRYRSPSSAELFDGQSSGNSPPSHAADHNSPEFEPSGKMLKRPGRQESLADKIYRFRATLLVVSIPLVLITFVLYMMPSSSSNESVAEFTLVNRKMSPEKNPGGSYAVIFDAGSSGSRVHVFHFDQNMDLIKPGLSAYAQNPQQAAESLVSLLDKAESVVPRELRSKTPVRVGATAGLRALEGDASDRILQAVRDLLKQRSSLRSEADAVTVLDGNQEGAFQWVTINYLLGNVGKDYSKTVGVVDLGGGSVQMAYAISETDAAVAPKVSEEEDPYVKEMFLRGRKYYLYVHSYLHYGLLAARAEILKVSDDAENPCILSGFDGSYNYGGKSFRASSSPSGASLNECKGIALKALKVNESTCTHMKCTFGGIWNGGGGDGQKNLFVASFFFDRAAEAGIADSNSPVAIVRPADFEDAAKKACQTKLEDAKSSYPHTEDGNLPYICMDLVYQYTLLVDGFGIYPWQEITLVKKVKYNDALVEAAWPLGSAIEAVSST 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc1263g00001 518 Pfam GDA1/CD39 (nucleoside phosphatase) family 127 517 IPR000407 GO:0016787
Stsc1263g00001 518 CDD NBD_sugar-kinase_HSP70_actin 131 278 - -
Stsc1263g00001 518 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 236 251 IPR000407 GO:0016787
Stsc1263g00001 518 Gene3D Exopolyphosphatase. Domain 2 237 496 - -
Stsc1263g00001 518 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 73 517 IPR000407 GO:0016787
Stsc1263g00001 518 MobiDBLite consensus disorder prediction 1 67 - -
Stsc1263g00001 518 MobiDBLite consensus disorder prediction 24 49 - -
Stsc1263g00001 518 FunFam Apyrase 1 237 496 - -
Stsc1263g00001 518 Gene3D - 129 512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc1263g00001 Stsc-Chr1263 2043 7118 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc1263g00001 67 517 Calmodulin-binding Proteins AT3G04080 69.114 0.0 620
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc1263g00001 K14641 - gmx:100786073 787.334