Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc1260g00001 ATGGGTGTGATCGTTGATGGAAGGAGGAGGCTGATGATGAACAATGACAAGAAAAAGAAGGAATCAATGATGATGAACTCTTACTTTGGAAATGTGCTTTCCATTCCATTTGGTGGGAAACCAATAAACGACCTAATGGAGAAGCCATTAAGTGAATTGGTCGAGGAGGTTCGCGAAATCGTGGAGGCGGCCGCAACAGAAGAACACTTCTTAGGGCTGGTTGACTGGGTGGAAGCACTCCGCCCAGTACCAGCCTTAACTCGCATTTACTGCGAGACCGGCGAAGGTCCGTGTCTCGTGGTGTCTTCAGGACAAAGATTTCCGGAGTCAAAGGTTGACTTTGGATGGGGAAAGCCTGTATTTGCATCATATCATTTTCCATGGGGTGGTGATTGTGGATATGTTATGCCAATGCCTAGCCCTAAAGGAAATGGGGATTGGATACTCTACATGCACCTTCATAAGGGTCTCATGGAATTCATGGAGTCTCATTTTTCTCATGTTTTTAGGCCTTTATCTTGGGACTACCTACTTTATTAG 540 0.4556 MGVIVDGRRRLMMNNDKKKKESMMMNSYFGNVLSIPFGGKPINDLMEKPLSELVEEVREIVEAAATEEHFLGLVDWVEALRPVPALTRIYCETGEGPCLVVSSGQRFPESKVDFGWGKPVFASYHFPWGGDCGYVMPMPSPKGNGDWILYMHLHKGLMEFMESHFSHVFRPLSWDYLLY 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc1260g00001 179 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 2 140 - -
Stsc1260g00001 179 Pfam Transferase family 2 167 - -
Stsc1260g00001 179 Gene3D - 1 168 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc1260g00001 Stsc-Chr1260 432 1001 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc1260g00001 3 162 Monolignol Biosynthesis Gene Families AT5G48930 26.829 1.81e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc1260g00001 - - aip:107606479 308.145