Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc125934g00001 TTGGAGTGGTTAAGAATTACTTTGGCTGAAAAGGGTGTCAACTATGACTGCAAGGAACAACATCTAAGGAACAAGAGCTCTTTGCTTCTTCAGATGAATCCAGCTCACAAGAAAATCCCAGTTCTGATCCACAATGGTAGACCAAAAGATGCAAAGAAAGCCACCGGGCTGTCCTCACTGCAGAAGAAGCTCTTCGGAGGGAAGGTACAGTCGTCGGAGGTGAAAGCGTTGACGGAGGTGAAGGGGAACACGAGGACACTGGCAATGGTGCTAAGAAGCGAGAGGGAGCTTCTCACCATGAACAAGGAGCGGGAAGGGGAGATTTGTCAGCTCAAGATCTTGCTAGACGAGAAGAACAAAGAAGTGGAGAAGCTGAAGGATCTGTGCTTGAAGCAAAGAGAAGAGATAAAGTCATTGAAGAATGCAATACTGTTCCCTGATGCAACAAATTCTGAGCTTCAGGAACTTGTAGAGAAGCAAAGCTCAGAGCTGAAGCAGGCTAAGATGGTCATTCCAACTCTACAGAAGCAGGTCACTTCTCTCACTGGTTAG 552 0.4674 LEWLRITLAEKGVNYDCKEQHLRNKSSLLLQMNPAHKKIPVLIHNGRPKDAKKATGLSSLQKKLFGGKVQSSEVKALTEVKGNTRTLAMVLRSERELLTMNKEREGEICQLKILLDEKNKEVEKLKDLCLKQREEIKSLKNAILFPDATNSELQELVEKQSSELKQAKMVIPTLQKQVTSLTG 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc125934g00001 183 Gene3D Glutaredoxin 3 50 - -
Stsc125934g00001 183 Coils Coil 150 170 - -
Stsc125934g00001 183 SUPERFAMILY Thioredoxin-like 3 47 IPR036249 -
Stsc125934g00001 183 Pfam Glutathione S-transferase, N-terminal domain 4 46 IPR004045 -
Stsc125934g00001 183 Coils Coil 115 142 - -
Stsc125934g00001 183 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 31 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc125934g00001 Stsc-Chr125934 40 1159 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc125934g00001 5 48 Glutathione S-transferase Gene Family AT1G78380 72.727 5.65e-17 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc125934g00001 - - pcin:129287055 200.675