Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc1252g00004 ATGCACCCCGAAGTACTCAACGCTGCCTTCTCCTCCGATTCCGACTCCGACTCCAACTCCGACTCCGACTATGACTCCGAGCCGCGCTCACCTGCTCACAAGAGACAACGTCGCAACTGTCGAGCTCCACCTCTGCCTTCGCCCGTCGACTACGACGACGCCTATTTCCAATCCTATTCCCACATGGGTGTTCACAACGAGATTTTCAAGGATTATGTGCTGATAAATACGTACAAGAAAGCAATCATGCATCACCGGGCCAATATAGAAGGCAAGGTGGTACTTGATGTTGGATGCGGTACCGGACTTCTTTCTATGTTTTGTGCTCAGGCTGGTGCAAGGAAGGTGTATGCAGTTGAAGCCAGCGACATTGCCGAGAAGGTGAAACATATCAACAGTCATACTATTACCATTCCTGAGCTAGCATCTATAACATTAGATTTTGAGACGAAAACACTGAAGCGAGGTATGGTAACTGGTTTTGCATTTTGGTTTGATGCTGATTTTTCTGGGCTACCGAATTCGGATATTAATCCTCAGAAAGCACCACTTTTGCTTACTGGGCCAGACAACCACCAGAAAACACATTGGGAACAGACTTTGATTTACTTTTCTGATCCAATAGAGGTGCAGCAATGTCAAACTATTAAGGGTTCAGTGAAATTGAGCCAATGCCAAAGAAATAATAGATTCATAGATGTTCGCCTAGAACTTAGTGCAAATGATATATCCTTGACCAAACAGTGTACTGTGGGCTGA 759 0.4545 MHPEVLNAAFSSDSDSDSNSDSDYDSEPRSPAHKRQRRNCRAPPLPSPVDYDDAYFQSYSHMGVHNEIFKDYVLINTYKKAIMHHRANIEGKVVLDVGCGTGLLSMFCAQAGARKVYAVEASDIAEKVKHINSHTITIPELASITLDFETKTLKRGMVTGFAFWFDADFSGLPNSDINPQKAPLLLTGPDNHQKTHWEQTLIYFSDPIEVQQCQTIKGSVKLSQCQRNNRFIDVRLELSANDISLTKQCTVG 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc1252g00004 252 Gene3D - 133 241 - -
Stsc1252g00004 252 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 127 244 IPR029063 -
Stsc1252g00004 252 Gene3D Vaccinia Virus protein VP39 45 132 IPR029063 -
Stsc1252g00004 252 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 58 126 IPR029063 -
Stsc1252g00004 252 CDD AdoMet_MTases 94 128 - -
Stsc1252g00004 252 Pfam Ribosomal protein L11 methyltransferase (PrmA) 90 140 - -
Stsc1252g00004 252 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 128 241 IPR025799 GO:0016274|GO:0018216
Stsc1252g00004 252 MobiDBLite consensus disorder prediction 1 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc1252g00004 Stsc-Chr1252 12367 14836 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc1252g00004 25 128 C2H2 Transcription Factor Family AT3G12270 41.346 5.10e-19 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc1252g00004 K11437 - apan:127263788 122.864