Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc1252g00003 ATGATGAGAATGAAGGTGTTTGTGATAGCCGCAGTTGCTTTTGCCTCTCTAGTTTCCTTCATCTCTGCCATTCATGGATCTGAGGCTCAGCTATCTTCTCTGTTTGAAGACAATGCCTTATTCTCATCACTATCAACCCAGCAGCCTTCACAGTCACAACCTCTCATGGTGCCCATTACTGTCATCAACGGAGCTGCTGCCAAAGGAGCTGTATGTTTGGATGGAACATCGCCTGCCTATCACTTTCATCCTGGATCCGGCTCAGGAGCCAATAGTTGGCTCATTCACTTAGAGGGAGGAGGATGGTGTAATACCATCAGAAATTGTGTATTTAGAAAGACAACTCGTCGTGGTTCCTTTAAATTCATGGAGAAGACACTGCCATTCACAGGGATATTGAGCAATAAACCTGAAGAAAACCCTGATTTCTTTAACTGGAACAGAGTTAAGATTCGTTATTGTGATGGAGCATCTTTCGCCGGAGACAGTCAAAACGAGGCTAACCAGCTTCAATTTCGAGGACAAAAAATATGGCTGGCTGCGATCGAGGAATTAATGTCCAAGGGAATGCAAAAAGCCAACCAGGCACTTTTGTCTGGATGCTCTGCAGGTGGTTTGGCATCTATAATACATTGTGATGAATTTGGAAGCATGTTTCCAAAATCTACCAAAGTGAAATGTTTGAGTGATGCAGGATTTTTTCTTGATGCAGTTGATGTATCTGGGGGACACACACTGAGGAATATGTTTGGAGGTGTAGTTACATTACAGGAAGTACAAAAGAACCTACCAAAAAGTTGTCTCAACCAACTGGATCCAATTTCATGCTTCTTTCCTCAGAACTTGATCCAGCATGTTCAAACTCCATTGTTTCTTCTCAATGCAGCTTATGATGCCTGGCAGGTCCAAGAAAGTCTAGCCCCCCATTCAGCTGATCCAAGTGGCTCTTGGAAAGATTGTAAAACAAATCATGCAAAGTGTAACTCATCTCAAATGCAGTTCCTCCAAGATTTCAGAAATCAAATGCTAAATGATGTGAAAGACTTCACAAGGTCATCTGCAACTGGATTGTTCATAAATTCTTGTTTTGCTCATTGCCAGTCTGAGAGACAAGATACATGGTTTGCTGATGACTCTCCACTTATTAACGACATGCCTGTGGCAATTGCTGTTGGAGACTGGTTTTTTGATCGAAAAACTATCAAAGCTGTTGATTGTGCTTATCCCTGTGACACAACCTGCCATAATCTGATCTTCAAGTGA 1263 0.4228 MMRMKVFVIAAVAFASLVSFISAIHGSEAQLSSLFEDNALFSSLSTQQPSQSQPLMVPITVINGAAAKGAVCLDGTSPAYHFHPGSGSGANSWLIHLEGGGWCNTIRNCVFRKTTRRGSFKFMEKTLPFTGILSNKPEENPDFFNWNRVKIRYCDGASFAGDSQNEANQLQFRGQKIWLAAIEELMSKGMQKANQALLSGCSAGGLASIIHCDEFGSMFPKSTKVKCLSDAGFFLDAVDVSGGHTLRNMFGGVVTLQEVQKNLPKSCLNQLDPISCFFPQNLIQHVQTPLFLLNAAYDAWQVQESLAPHSADPSGSWKDCKTNHAKCNSSQMQFLQDFRNQMLNDVKDFTRSSATGLFINSCFAHCQSERQDTWFADDSPLINDMPVAIAVGDWFFDRKTIKAVDCAYPCDTTCHNLIFK 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc1252g00003 420 PANTHER NOTUM-RELATED 39 416 IPR004963 GO:0016787
Stsc1252g00003 420 Pfam Pectinacetylesterase 51 400 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc1252g00003 Stsc-Chr1252 6648 10796 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc1252g00003 6 420 Carbohydrate Esterase AT2G46930 67.229 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc1252g00003 K19882 - gmx:100785270 689.493