Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc125192g00002 TTGGAGATAAAACAAGCCTCTGAAGGATCTCATCACGTTGCTGGTGTTGTAGAAGCTAAAGTTGAAAACATTAAGGAGGTCTGGGATGTATTGCAAGTTGGAAGCAATGCCAGAGCAGTGGGAAGTAATAACGTTAACGAGCATAGTAATCGATCTCACTGCATGCTTTGTATAATGGTAAAGGCTAAAAATTTACTGAATGGCGAGTGTACCAAGAGCAAGCTTTGGCTTGTGGATTTGGCGGGTAGTGAGAGACTTGCAAAGACTGATGTATAG 276 0.4203 LEIKQASEGSHHVAGVVEAKVENIKEVWDVLQVGSNARAVGSNNVNEHSNRSHCMLCIMVKAKNLLNGECTKSKLWLVDLAGSERLAKTDV 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc125192g00002 91 Gene3D Kinesin motor domain 1 91 IPR036961 -
Stsc125192g00002 91 Pfam Kinesin motor domain 2 90 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc125192g00002 91 ProSitePatterns Kinesin motor domain signature. 73 84 IPR019821 GO:0003777|GO:0005524|GO:0007018
Stsc125192g00002 91 PANTHER KINESIN-LIKE PROTEIN KLP-3 2 91 IPR027640 GO:0003777|GO:0007018
Stsc125192g00002 91 PRINTS Kinesin heavy chain signature 74 91 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc125192g00002 91 PRINTS Kinesin heavy chain signature 43 60 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc125192g00002 91 ProSiteProfiles Kinesin motor domain profile. 1 91 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc125192g00002 91 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 90 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc125192g00002 Stsc-Chr125192 1333 1725 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc125192g00002 1 89 Calmodulin-binding Proteins AT5G65930 38.202 3.91e-14 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc125192g00002 K10406 - osa:4331382 174.481