Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc125104g00001 GCGTGTCAAGTGTGGATTGCTGCTAGCATAATGTCTATAAATGCTGGGGAGAACGATTGGTGTTACCCGGCATGCACACAGTGTGAAAAGAAGGTTGAGGAGGGACAGAATGGAAAATATCTATGCAAAAGGTGTGAAACAGATGAAGCTGAAGCAGATTTAAAGTACAAGGTTGAGATCGTGGCATGTGATGGCACTGGAGGTATCTCTTTGCTATTATGGGATACCCAGGATAATGGGTGTAGCAATGAGGTCAATGAGGATTCAGGTGTGATTAGTCTAGAGCAAAAAAATGGTGCTGGTGCTGATGTG 312 0.4423 ACQVWIAASIMSINAGENDWCYPACTQCEKKVEEGQNGKYLCKRCETDEAEADLKYKVEIVACDGTGGISLLLWDTQDNGCSNEVNEDSGVISLEQKNGAGADV 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc125104g00001 104 Gene3D - 1 89 IPR012340 -
Stsc125104g00001 104 Pfam Replication factor-A C terminal domain 8 75 IPR013955 -
Stsc125104g00001 104 SUPERFAMILY Nucleic acid-binding proteins 4 76 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc125104g00001 Stsc-Chr125104 284 1086 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc125104g00001 5 80 Core DNA Replication Machinery Family AT2G06510 30.952 1.35e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc125104g00001 - K07466 ahf:114927278 84.7297