Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc124g00005 ATGTTCCCTTGGGTTGAACTAAGGCAGGGTTATGGCCTAACAGAAAGTTCAGCTGCAGCTACCTTTTTTGCGTCAGATAGAGACTCTAAAGCTCGGCCAGACTCGTGCGGCCAGTTGGTTCCAACCTTTTATGCAAAAGTGGTAGACATTGATAGCGGAAAGCCTTTGCCTCCACACAAGAAAGGAGAGTTGTGGCTGAAAAGTCCTACTATTATGAAAGAATATCTGGGAAATTCGGAGGCAACAACTGCAACAGTTGATTCAGATGGCTGGCTGAAGACAGGTGATCTCAGTTATATTGATGAAGGTGGATTTGTTTATGTAGTTGAACGGATAAAGGAGCTGATCAAGCACAATGGATATCAGGTGGCTCCTGCAGAACTGGAGTCTTTATTGCTAAGCCATCCCCTTATTGTTGATGCAGCTGTTATACCGTGTGTTTCTCTCAGCACAACTTCACTCTCATTTTCATTAACCTGTGAGTTTCTCATGTATAAAAGTTCTGTTGCAGGGTTGAAGATGAAGCAACTGGACAGATACCAATGGCCTATGTTGTGA 558 0.4373 MFPWVELRQGYGLTESSAAATFFASDRDSKARPDSCGQLVPTFYAKVVDIDSGKPLPPHKKGELWLKSPTIMKEYLGNSEATTATVDSDGWLKTGDLSYIDEGGFVYVVERIKELIKHNGYQVAPAELESLLLSHPLIVDAAVIPCVSLSTTSLSFSLTCEFLMYKSSVAGLKMKQLDRYQWPML 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc124g00005 185 Gene3D - 2 32 - -
Stsc124g00005 185 Gene3D - 112 155 IPR045851 -
Stsc124g00005 185 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 2 145 - -
Stsc124g00005 185 Pfam AMP-binding enzyme 6 117 IPR000873 -
Stsc124g00005 185 Gene3D Luciferase; Domain 3 33 111 - -
Stsc124g00005 185 SUPERFAMILY Acetyl-CoA synthetase-like 2 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc124g00005 Stsc-Chr124 14190 15654 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc124g00005 2 181 Monolignol Biosynthesis Gene Families AT1G20480 49.457 3.10e-53 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc124g00005 K10526 - gmx:100796728 258.84