Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc124730g00001 ATGTGTACCACTAACAAAATGCAGAAGAGGGAGAAAGTGGAGCAGCTGCTACTTGAACCGGCCGTTAATTATGGTATAATTTGCAACGAACTGAAAAAAGTCTATCCGGGGAGGGATGGAAACCCGTATAAAGAAGTAGTGAGAGGGTTGTTCCTTGCTGTTCCTCAAGGGGAATGCTTTGGCATGCTTGGTCCCAATGATGCTGGAAAGACTTCTTTTATTAGTATGATGATTGGTCGGACAAAGCCAACCTCTGGTACTACATATGTTCAAGGCTTTGACATAAGAACTGATATGAATGGACTATACACTAGCATGGCTTGCTTTGGGAAAGGATGA 339 0.4307 MCTTNKMQKREKVEQLLLEPAVNYGIICNELKKVYPGRDGNPYKEVVRGLFLAVPQGECFGMLGPNDAGKTSFISMMIGRTKPTSGTTYVQGFDIRTDMNGLYTSMACFGKG 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc124730g00001 112 Pfam ABC transporter 51 97 IPR003439 GO:0005524
Stsc124730g00001 112 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 18 98 IPR027417 -
Stsc124730g00001 112 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 7 106 IPR026082 GO:0016020|GO:0055085|GO:0140359
Stsc124730g00001 112 Gene3D - 23 110 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc124730g00001 Stsc-Chr124730 729 1801 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc124730g00001 30 96 Calmodulin-binding Proteins AT2G36910 35.714 1.88e-06 43.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc124730g00001 - - gmx:100792897 164.081