Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc124524g00001 ATGAGGGGAGTACGCAAAATGGGTTGTGATGCATCCATACTCATAGACTCACCAACCAACACCTCAGAGAAAAACGCAGCTGCTAATAGAAGCGTTCGAGGATACGATTTCATTGATCACCTCAAACAAATCCTAGAATCTCAATGCCCTGCAACAGTTTCATGCGCAGATATCATAACACTTGCCACCAGAGACGCCCTTGCCTTATCCGGCGGCCCCAAATACGCCGTCCCCACCGGTCGCCGCGACGGACTAGTATCCGAAAACACCGATGTTGACTTACCGGGAGGAAGTCAGTCGGTGCAATCCGTGTCACAGTTCTTCGCAGAGAAGGGAATGACGGTGGAGGAAATGGTGGTTCTCTTGGGTGGTGGACACAGCATTGGTGTCGCTCATTGCTTTTCGTTTCAGAGAAGGCTTTCGAGTTTTAATGGGACACATGATCCTACAATGGATCCTGCGTTGGATTCTGAGCTTGTGAAGATTTGCAACTCAACTCAAGTTTTTCCGCCTCCGAGTACGTTCTTGGATCAGAACACTTCATTTGTACTTGATAACGAGATATATAAGCAGATTCTTTCGAAGAAGGGTGTGTTGAAGATTGACCAGGAGCTTGCTTTGGATAGTTCCACTAAAGATTTTGTGGCTAGTTTTGCTGCTAATGGTGATGAGTTTCAAAAGAATTTTGCAGATGCAATTGTAAAGATGGGGAAGATTGAGGTTTTAATTGGGAATGAAGGAGAGATTCGCAAAAATTGTAGGGCCTTTTAA 771 0.4553 MRGVRKMGCDASILIDSPTNTSEKNAAANRSVRGYDFIDHLKQILESQCPATVSCADIITLATRDALALSGGPKYAVPTGRRDGLVSENTDVDLPGGSQSVQSVSQFFAEKGMTVEEMVVLLGGGHSIGVAHCFSFQRRLSSFNGTHDPTMDPALDSELVKICNSTQVFPPPSTFLDQNTSFVLDNEIYKQILSKKGVLKIDQELALDSSTKDFVASFAANGDEFQKNFADAIVKMGKIEVLIGNEGEIRKNCRAF 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc124524g00001 256 PRINTS Haem peroxidase superfamily signature 53 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc124524g00001 256 PRINTS Haem peroxidase superfamily signature 118 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc124524g00001 256 PRINTS Haem peroxidase superfamily signature 71 83 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc124524g00001 256 PRINTS Haem peroxidase superfamily signature 177 192 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc124524g00001 256 CDD secretory_peroxidase 8 256 IPR033905 GO:0004601|GO:0042744
Stsc124524g00001 256 PANTHER - 7 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc124524g00001 256 Gene3D - 8 255 - -
Stsc124524g00001 256 SUPERFAMILY Heme-dependent peroxidases 8 255 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc124524g00001 256 Gene3D Peroxidase, domain 2 95 236 - -
Stsc124524g00001 256 ProSiteProfiles Plant heme peroxidase family profile. 8 256 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc124524g00001 256 FunFam Peroxidase 95 236 - -
Stsc124524g00001 256 PRINTS Plant peroxidase signature 117 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc124524g00001 256 PRINTS Plant peroxidase signature 191 208 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc124524g00001 256 PRINTS Plant peroxidase signature 71 86 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc124524g00001 256 PRINTS Plant peroxidase signature 231 244 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc124524g00001 256 PRINTS Plant peroxidase signature 33 46 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc124524g00001 256 PRINTS Plant peroxidase signature 175 190 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc124524g00001 256 PRINTS Plant peroxidase signature 52 62 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc124524g00001 256 Pfam Peroxidase 7 221 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc124524g00001 Stsc-Chr124524 1175 3518 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc124524g00001 8 256 Peroxidase AT4G26010 54.800 5.02e-93 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc124524g00001 K00430 - gmx:100777946 307.375