Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc123g00012 ATGTCATTGGATGAACCAAACGACGTTATAGTGTCACCCAAGGGCACCTTCTCTGCTGGCTTCTACGCTGTTGGCGAAAACGCTTATTGCTTTGGCGTTTGGTTTTCCCAGAACCCTACTCTTGTATGGATGGCAAATCATGACCAGCCAGTCAACGGAAAACACTCAAAGCTTTCCTTACTCTCCAATGGTAACCTTGTTCTACTTGATGCCGACAGTTCCCACGTTTGGTCAACAGACACATTTTCAACGCCGTCTTCCGCCGTGCATTTGGTTCTGTATGACACCGGAAACCTTGTTTTAATGGAAGACGGTGACAGCAACAACAGAAGCAGCGCCGTGTTATGGCAAAGCTTTGATTTCCCTACGGATACTCTTCTTCCTGAGCAAGTGTTCACTCGATTCACCAAACTCATCTCCTCGAAAAGCAAGACAAACAAGTCCACTGGCTTGTACACGTTGTTCTTCGACAATGATAACGTTCTTCGTCTTGTTTACGATGGCCCTGAAGTTTCAGGGCTGTACTGGCCAAATCCATGGAATCTTGATTGGAACAACTTCAGGAGCAGTTACAACAGCAGCAGAGTTGCAGTGTTGGACACTCTGGGAATCTTTATTTCCTCTGATAATTTCACTTTCAGGACTTCCGATTACGGCTCCGTCATCCAGCGAAGGATAACACTTGAGCCCAACGGAAACCTTCTTGTTTATAGCCGTAGCAATGATCAAGAAAAATGGTATGTTTCGTGGCAAGCATTTTCAAGACCATGCAGGATCCATGGAGTTTGTGGGCCCAACAGTTTGTGCACTTACCATACTGACTCTACCACCCGATGCTCTTGCCTTCCCGGCCATAAGATGAAGCAACCAAATGATTGGTCTTATGGCTGTGAACCCAGATTCTCTCTGTCTTGCCAGAACAATGAAAGCGCTTCACGATTCTTATCTATAAGTAATGTTGAGTTGTATGGGTATGATTATGGACTCATGACAAATTACACATTAGAACAGTGTAAGGATTTGTGCCTCCAACTATGCGATTGCAGAGGTGTTCAGTATACTTATAACAAGGCCTCTGGTACCAACAGTTGTTATGTCAAGCTTCAGTTAAGGAATGCTTATCGCATTTCATATTACAATGCTGAATTTTATCTGAAGCTTCCGGCCAATAGTACATATTCTTTTCATGATGATCAAGTTTCAATAGTTAGTAAAAACAACAATCTTGATTGTCCTGTTGGGGAAGAAACAGTACAACTTGAAAGGAGTTATATCAAATGGCATGAAAGCAGATACTTTAAGTTCTTGTTGTGGTTTGCCGGAGGATTTGGGATATTTGAGATGCTGTGCATATTTGTGGTCTGGAACCTCTTGGTAAGGTTTAGGGTGCATTCTGGTGCAGATGAAAGAGTCTATGATTCAGCTTTGGCAGGGTTTAGAAGATTCAGTTACTCTGAGCTGAAACAAGCCACCAAAGGTTTTAGCCAAGAGATTGGAAAGGGTGCATGGGGGAGTGTATACAAAGGTGTACTCTCCGATGGACGAGTGGCGGCGGTGAAGAGACTAATGGAAGCGAATCAAGGAGAAGAGGAGTTCCTTGCTGAAGTGAGCAGCATTGGGAGGCTTAATCACATGAACTTGATTGAGATGTGGGGATACTGTGCTGAAGGGAAACACAGGCTTCTTGTTTATGAGCACATGGAGCATGGTTCTCTTGCTGAGAATCTTAGGACAAATAGATTGGATTGGTCCCAAAGGTTTGAGATTGCTTTGGGTACAGCCAAAGGTTTGTGTTATCTTCATGATGAGTGTTTGGATTGGATTTTGCATTGTGATGTAAAGCCACAGAATATTCTTCTGGATTCCAATTTTCAACCCAAGATAGCTGATTTTGGATTGTCAAAGCTGCTAAAAAGAAGTGACACTGATAAGTACTCTAGCTTTTCCAAGATAAGAGGAACCAGGGGATACATGGCTCCTGAGTGGGTTTTGAACCTCCCAATAACATCCAAGGTTGATGTTTATAGCTATGGAATTGTTGTGTTGGAAATGTTCACTGGAAAGAGCGTAACCAAGAACGTTTGTACTAGTAGTGATGGAGTAGAGAATAATAATCAACATATGTACCTGGTTGCATGGCTGAGAGAGAAACAGAATAAGGGATTTCGTAGTGGTTGGGTTAGTGAAATATTAGACCCCACCATAGAAGGTGATTATGATGAAAATAAGTTGGAAGCTTTGGCTACAGTTGCTTTGCAATGTGTACAGGATGAGAGGGACAAAAGACCTACCATGAGCCAAGTGGTAGAAATGCTTCAGAAATATTTGTAA 2331 0.4273 MSLDEPNDVIVSPKGTFSAGFYAVGENAYCFGVWFSQNPTLVWMANHDQPVNGKHSKLSLLSNGNLVLLDADSSHVWSTDTFSTPSSAVHLVLYDTGNLVLMEDGDSNNRSSAVLWQSFDFPTDTLLPEQVFTRFTKLISSKSKTNKSTGLYTLFFDNDNVLRLVYDGPEVSGLYWPNPWNLDWNNFRSSYNSSRVAVLDTLGIFISSDNFTFRTSDYGSVIQRRITLEPNGNLLVYSRSNDQEKWYVSWQAFSRPCRIHGVCGPNSLCTYHTDSTTRCSCLPGHKMKQPNDWSYGCEPRFSLSCQNNESASRFLSISNVELYGYDYGLMTNYTLEQCKDLCLQLCDCRGVQYTYNKASGTNSCYVKLQLRNAYRISYYNAEFYLKLPANSTYSFHDDQVSIVSKNNNLDCPVGEETVQLERSYIKWHESRYFKFLLWFAGGFGIFEMLCIFVVWNLLVRFRVHSGADERVYDSALAGFRRFSYSELKQATKGFSQEIGKGAWGSVYKGVLSDGRVAAVKRLMEANQGEEEFLAEVSSIGRLNHMNLIEMWGYCAEGKHRLLVYEHMEHGSLAENLRTNRLDWSQRFEIALGTAKGLCYLHDECLDWILHCDVKPQNILLDSNFQPKIADFGLSKLLKRSDTDKYSSFSKIRGTRGYMAPEWVLNLPITSKVDVYSYGIVVLEMFTGKSVTKNVCTSSDGVENNNQHMYLVAWLREKQNKGFRSGWVSEILDPTIEGDYDENKLEALATVALQCVQDERDKRPTMSQVVEMLQKYL 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc123g00012 776 ProSiteProfiles Protein kinase domain profile. 492 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc123g00012 776 Gene3D Transferase(Phosphotransferase) domain 1 567 776 - -
Stsc123g00012 776 SMART blect_4 1 122 IPR001480 -
Stsc123g00012 776 CDD STKc_IRAK 498 774 - -
Stsc123g00012 776 FunFam Putative receptor-like protein kinase 567 776 - -
Stsc123g00012 776 FunFam S-receptor-like serine/threonine-protein kinase 462 566 - -
Stsc123g00012 776 ProSiteProfiles PAN/Apple domain profile. 305 383 IPR003609 -
Stsc123g00012 776 ProSiteProfiles Bulb-type lectin domain profile. 1 114 IPR001480 -
Stsc123g00012 776 ProSitePatterns Protein kinases ATP-binding region signature. 498 520 IPR017441 GO:0005524
Stsc123g00012 776 CDD PAN_AP_plant 301 388 - -
Stsc123g00012 776 Pfam Protein kinase domain 495 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc123g00012 776 CDD B_lectin 10 122 IPR001480 -
Stsc123g00012 776 ProSitePatterns Serine/Threonine protein kinases active-site signature. 608 620 IPR008271 GO:0004672|GO:0006468
Stsc123g00012 776 Pfam D-mannose binding lectin 40 133 IPR001480 -
Stsc123g00012 776 Gene3D - 3 120 IPR036426 -
Stsc123g00012 776 Pfam S-locus glycoprotein domain 210 288 IPR000858 GO:0048544
Stsc123g00012 776 SMART ntp_6 309 387 IPR003609 -
Stsc123g00012 776 PIRSF SRK 1 776 IPR024171 GO:0004674
Stsc123g00012 776 PANTHER OS07G0415500 PROTEIN 10 773 - -
Stsc123g00012 776 Pfam PAN-like domain 305 368 IPR003609 -
Stsc123g00012 776 SMART serkin_6 492 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc123g00012 776 Gene3D Phosphorylase Kinase; domain 1 460 566 - -
Stsc123g00012 776 SUPERFAMILY Protein kinase-like (PK-like) 474 772 IPR011009 -
Stsc123g00012 776 SUPERFAMILY alpha-D-mannose-specific plant lectins 31 139 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc123g00012 Stsc-Chr123 86793 89123 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc123g00012 460 772 Receptor kinase-like Gene Family AT3G58690 40.615 8.03e-67 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Stsc123g00012 Pkinase 6.3e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc123g00012 - - gmx:100792388 1041.95