Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc123826g00001 ATGCTATTTTTCCTTAGTCACCCCTGCCTCTCTCGTTCTCTCTCACCCCTTCTCTCTTGGAAGTCTGCACTCTGCCTCGCCTCCGGCCTCCGCGAGCTTTCTTCGTCGCCCGTGCTAGCCGCATTCCTCACCTGTAACTCCGCCGTGTCGGCTACGCCTCTCACCGACGCACTGTCTCTCCTCTGTCTCTGCCTGTTGCCTCTGCATCTCGCCGTGCCTTCCTCCCTCGCTGCAGACTGCAGGGAGACAGAAATGGAATCACAAGAGACATCTTCTATAGGAGCAGAAGCACTTCTACATATGTCTCCTGGATCAACGGTTTCTGTTGCATACCACCCACTTTTTGGACCACACGATGACATGATGGTTCTAGAGCTTGATGATAAACTTCTTCCAGATGTTCTGAATGAAAGGGTGGTAATAAGAGGACAGCCCGATGAAGATGCAGTTCTTTGCACTCAATCCAAAACATACGCAATGAAGTTTGTCGGAACTTCGAATTCTGTTTTGCTTGTACCACCAGCAAATCAATATGTTTCTGATCAAAATCCAAGAAAGAACAGCATGGGTAATCATGAGGGAAAAGTTGTTGCACCTGTGATCAAAGTTGTACCTGGTAATATGGAACTTGTCGAGGTTGCCCCTAGACTTGACAAACTTAAATTGCTTCTCTCGCAGAACCCTTACACGCTTGATGAGTATGACATGGAAAATTCAGAAGAGAATCAGGAATCTAGAGCAGGATTATATAACTGGAAGGATCTTATAAACAATATTCAAGCTAGTGACGAGGAACTAAGATCTGGACTGCAGATGCTCTTGGCTGTGGAGATTAATGGCTTTTGGAGACTAGTAGATGAGAGATACATGAACATGATTCTGGAAATGCTTTTGAGAAATGCAGTGTTGAATGACTGGTCGCTGAGTGCTCTTAATGAAGATGCAGTCGTAAGCATGCTGGTTACCGATGGATTTCCTGCAGTACTTGCAAGGCATTGCTTGCATGTATATGGTAATAAAGTAGACGGCAGCACAGGTACGTATTCATGGAAGTTGGACAAGAAGCGGATCTGCGTTCATTTTGCTAGAGAAATTCTGAGAGGGGGCAAGAGAAAGCTGGAGAGCTTTATGGATGAGTGGAGGCAGAGGACTCCTGATGAAATGTTGCCAACTTTTGATCTTGTTGAAGGAGAAGTTTTGTCAGAGAGAGTTGGAGTTGAGACATGGGTCCGCGAGTTCAGTGTCTCTTCGTTGCCATCCACTCCAGCTGAGCGATTCTCGATTCTTTTCAGAGAGCGGCCCAAATGGGAATGGAAAGATCTGCAGCCATATATTAGGGACCTGAATGTGCCAGGTCTTTCTTCTGAAGGTTTGCTATTGAAATACACTCGAAGAACACAACCATCACCTGAAATAGAACCAGTTTTCAGTGCAAGATAG 1440 0.4583 MLFFLSHPCLSRSLSPLLSWKSALCLASGLRELSSSPVLAAFLTCNSAVSATPLTDALSLLCLCLLPLHLAVPSSLAADCRETEMESQETSSIGAEALLHMSPGSTVSVAYHPLFGPHDDMMVLELDDKLLPDVLNERVVIRGQPDEDAVLCTQSKTYAMKFVGTSNSVLLVPPANQYVSDQNPRKNSMGNHEGKVVAPVIKVVPGNMELVEVAPRLDKLKLLLSQNPYTLDEYDMENSEENQESRAGLYNWKDLINNIQASDEELRSGLQMLLAVEINGFWRLVDERYMNMILEMLLRNAVLNDWSLSALNEDAVVSMLVTDGFPAVLARHCLHVYGNKVDGSTGTYSWKLDKKRICVHFAREILRGGKRKLESFMDEWRQRTPDEMLPTFDLVEGEVLSERVGVETWVREFSVSSLPSTPAERFSILFRERPKWEWKDLQPYIRDLNVPGLSSEGLLLKYTRRTQPSPEIEPVFSAR 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc123826g00001 479 Pfam Sister chromatid cohesion protein Dcc1 122 445 IPR019128 GO:0007064|GO:0031390
Stsc123826g00001 479 PANTHER SISTER CHROMATID COHESION PROTEIN DCC1-RELATED 94 479 IPR019128 GO:0007064|GO:0031390
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc123826g00001 94 479 C3H Transcription Factor Family AT2G44580 55.051 2.69e-156 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc123826g00001 K11271 - gmx:100817511 622.468