Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc123794g00001 ATGCAACACGCGATTAGGATCCAGAGAGCGATTCTAAGGCAAGGTAGCACTGCGATTACAAAGAACGGGTGTATAAGAAGCGGGAGGAAGTTTCGGTGGGTGAAGCTTGAGGATTCGGCTGACACCAAGTTGCTTGGTTATCCGCAGGCATTGACTAAGTTCTGTTATTTTCTTATGGATGCTTTGAGAGAGAAGGGGGCAAGGATGAAGCCTTTGCTTTGTGCTTGCTTGTCACAAGAACCCAATAGGATGTTGATTGTAGGCGTTTATGGGAAGCCTCGCCTGGCTGGAGCTCAGGGGAATACATTTGGGATTGCGTTTAGGAACGCTGCTGAGGAGATTGGAGCAGAGTTCTTCCATGAGTTGTTTGAGTCATCATGGATTCTTCTTGATTCTTCCACTGTAAATTCGTTCATGGTCAGGTTGACTGAGAAGCTATGA 441 0.4671 MQHAIRIQRAILRQGSTAITKNGCIRSGRKFRWVKLEDSADTKLLGYPQALTKFCYFLMDALREKGARMKPLLCACLSQEPNRMLIVGVYGKPRLAGAQGNTFGIAFRNAAEEIGAEFFHELFESSWILLDSSTVNSFMVRLTEKL 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc123794g00001 146 PANTHER CDC45-RELATED PROTEIN 1 145 IPR003874 GO:0006270
Stsc123794g00001 146 Pfam CDC45-like protein 1 145 IPR003874 GO:0006270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc123794g00001 Stsc-Chr123794 1 1702 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc123794g00001 1 146 Core DNA Replication Machinery Family AT3G25100 77.397 6.66e-81 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc123794g00001 K06628 - jre:109013821 269.626