Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc123460g00001 ATGTGGGGAAAGTTGTTGATGAAATCCTTAGGGAAAAGGCTTCAAAGCCTTGTTGTTAAATCAAATTGCACTAATTGTGGTAATAATCAACACAAGAGTAGTGATGAAGAGAATTGCAATGTTTGCTTAGGAGAAAGCAAAGAATGCAAGTGTGTTCACAACACCAATCACAATAATAATAATAATTATAATTATAATAATAGTAGCAATATTGAAGGAGGTACCAATATGATGATGGAAACAAAAAATGATGCTTCTGATGAAGATGATGAGGCCAATAGCTCTTTTACTCATGCTGTCATCAACATGGTGGGGATGCTTATAGGTTTGGGGCAATTATCAACTCCATATGCTGTGGAACAAGGTGGCTGGGCATATTCCTCAACCTTACTCATAGGGCTTGGAGTTATGTGCACTTACACTTCACACATCCTTGGCAAATGCCTTCGCAGTTACCCAACAAAGCTAAGAAGCTACGCCGACATCGGCGGCCAAGCATTCGGCTCAAAAGGAAGGTTACTAGTGTCTACCTTCATATACATGGAGATCTTCATGGCTCTTATCTCCTACACCATCTCCCTACATGACAACATAGTAACCGTCTTCTTAGGAACCACTTTGAAGCTTCACTTGGAAAAGTTATCAACTCCACAACTACTAACTATTGTGGCTGTCTTGATTGCTCTCCCTACAATGTGGATAAGAAATCTTTCTTCCATTTCATTTCTTTCGACAGTTGGGATTCTCATGTCGGTTGTCATTTTCGTGTCGTTGGCGGCTGCGGCGGTTTTCGGAGGTGTTCTGACTAATCATAGCATACCGGTTTTTCAGATGCATAATGTTCCTTCAATTTCCGGGCTTTTTCTTTTCAGCTACGGAGGACACATTGTTTTCCCTAATTTATATAAAGCTATGAAGGACCCTTCAAAGTTTACTAAGGTCTCCATTGTGAGCTTCACAATTGTGACAGCACTATACATGATAATTGGGTTCCTAGGTGCAAAAATGTTTGGTCCAAATGTGAACTCTCAATTCACTCTAAGCATGCCAGCAAAGCAAATCATAACAAAGGTTGCTCTATGGGCCACAGTGTTAACCCCCATGACCAAATATGCACTTGAATTTGCACCTTTTGCAATTCACTTAGAGCATAAGCTTCCAAGTACAATGAGTGGAAGGACAAAAATGGTGATTAGGGGTTGTGCAGGTTCAATCTTCCTTTTGATTATACTTGCACTTGCTCTTTCAGTGCCATATTTTGAGCATGTTCTTAGCCTCACTGGCTCTCTAGTTAGTGCAGCAGTTTCTTTGATTCTGCCATGTGCTTTCTATCTCAAGATCTTTTGGGGTCAAATAGCAAAGTCCCATTTGGTCCTAAACTTTTTTCTCATCACATTAGGGCTCTTTCTGGGGGTGATGGGAACTATTTCATCATCAAGATCATTGGTGGAGAATTTTCAAGCACATCACTCAAACTGA 1479 0.4037 MWGKLLMKSLGKRLQSLVVKSNCTNCGNNQHKSSDEENCNVCLGESKECKCVHNTNHNNNNNYNYNNSSNIEGGTNMMMETKNDASDEDDEANSSFTHAVINMVGMLIGLGQLSTPYAVEQGGWAYSSTLLIGLGVMCTYTSHILGKCLRSYPTKLRSYADIGGQAFGSKGRLLVSTFIYMEIFMALISYTISLHDNIVTVFLGTTLKLHLEKLSTPQLLTIVAVLIALPTMWIRNLSSISFLSTVGILMSVVIFVSLAAAAVFGGVLTNHSIPVFQMHNVPSISGLFLFSYGGHIVFPNLYKAMKDPSKFTKVSIVSFTIVTALYMIIGFLGAKMFGPNVNSQFTLSMPAKQIITKVALWATVLTPMTKYALEFAPFAIHLEHKLPSTMSGRTKMVIRGCAGSIFLLIILALALSVPYFEHVLSLTGSLVSAAVSLILPCAFYLKIFWGQIAKSHLVLNFFLITLGLFLGVMGTISSSRSLVENFQAHHSN 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc123460g00001 492 PANTHER AMINO ACID TRANSPORTER 85 475 - -
Stsc123460g00001 492 Pfam Transmembrane amino acid transporter protein 93 476 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc123460g00001 Stsc-Chr123460 1708 6242 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc123460g00001 39 490 Amino Acid or Auxin Permease AAAP Family AT5G16740 57.395 3.29e-163 467
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc123460g00001 - - adu:107482339 686.797