Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc123345g00001 ATGGAGGAAAGAGATCCAGCTATCTCACAAGCAAAGAGACGGAAAAGAATGATCGTCAGCCTACCTAAGATGTTTAACATGATCCACCTCTTGCTCCAGTCAATGAACCGTTCTGTTATCATGAAAGCGGAGCTTGTGAGCAAGATAATCTCTGGCAACTGTGGTATTGTTGATAGAAGAGAAGTAGAAGAGCAACTGAATTTGTTGCTAGAATCAGCACCAGAATGGATTTCTGAGAAGTTGGCCTCTAGTGGGGATTTCCTTTTCTGCATAAATAAAATGGTGGATGCCATGGCCATACGCGCAGCACTTGAAGAAGCGAAATGA 327 0.4312 MEERDPAISQAKRRKRMIVSLPKMFNMIHLLLQSMNRSVIMKAELVSKIISGNCGIVDRREVEEQLNLLLESAPEWISEKLASSGDFLFCINKMVDAMAIRAALEEAK 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc123345g00001 108 PANTHER DNA REPLICATION FACTOR CDT1 2 108 IPR045173 GO:0003677|GO:0030174|GO:0071163
Stsc123345g00001 108 Pfam DNA replication factor Cdt1 C-terminal domain 4 80 IPR032054 -
Stsc123345g00001 108 Gene3D - 8 108 IPR038090 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc123345g00001 Stsc-Chr123345 290 859 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc123345g00001 1 106 Core DNA Replication Machinery Family AT2G31270 60.377 3.47e-38 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc123345g00001 K10727 - qsa:O6P43_006919 154.451