Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc123258g00001 ATGCTTGCTACTGATGGTAAACTTGCCAATGCAACAATTCAAGATGCTCAATTTTGTAAGCAAGGAGCACTTGACCCGGCAAAAGTGAAAGGGAAAGTCGTGCACTGCATTAAAGAAGATAACATAAAATCAGCTGCCGAGAGTCTGGAAGCGAAATACGCGGGCGCATTGGGAATGACGTTGGAGAATCAAAAGAAACAAGGCAAAACAGTTAACGATGACACTCATATGGTGCCTACTGTGGGTACTCATAAGGCTCCTCCACCTGAACAAAAAAGTACTACTAGTCAGCCTCCTCCTAAGAAAGGGAAGCCACCCCACTCAATTCCTCCTAATCAACGGCAGAATCCTAATTATGACGTCATAGCTGCCACCGCTCCACCAAGCCCGTCTCTTAAAGTAATGATGTCCCCAGCAAAAACAGTGATTAAAACCAAGCCAGCTCCAGTTATGGCTTCCTACTCATCCAGAGGACCCAATAAGATTCAGCCATCCATACTTAAGCCTGACGTGATTGCACCTGGAGTAAACATACTTGCTGCCTATTCACTAGGCACAAGTCCCACTACCCTCCTGCAAGATACTCGCCGCTTTGAATTCAATGTGCTGCAAGGAACTTCAATGTCTTCTCCTCACGTTTCTGGTATTGCTGGGCTTCTCAAAACTCTTCATCCTACTTGGAGTCCCGCTGCTATTAAATCAGCAATCATGACTACTGGTACTATACACCTATACACAACCACAAGGGACAACACAAACAAGCCAATCCAAGATGCATTTGATAATGATTTAGCAAACTCTTTTGATTATGGGTCAGGACATGTTCAACCTGACCTTGCAATAGAGCCAGGACTTGTTTATGATCTTCACCTTATTGATTACCTCAACTTCTTGTGTGCCTCCGAATACAATCAACAACTCATCTCATCACTTAATTACAATAGGACTTTCGTTTGTAAGGGAGCTCATAGCATGAATGACTTGAACTACCCTTCTATCACATTGCCACATCTTGGGTTGGATCCGGTCACAGTTAATCGTACACTCACAAATGTAGGCCCTCCTGGGACATACAATGTAACTGCCAAATTGGATGGATCCAAAGTTACTGTTGTGCCCAATTCCTTGACTTTCACAAAGTTGTATGAAAAGAAGACATTTAAGGTGATTGTGCAGGCATCAAGTGTGCTTCAGCGTAACAAATATCAATTTGGTGAATTGGTTTGGTCAGATGGAAAGCACAGAGTTAGGAGTCCTGTTACCGTCCAGCGCCAGTGA 1278 0.4374 MLATDGKLANATIQDAQFCKQGALDPAKVKGKVVHCIKEDNIKSAAESLEAKYAGALGMTLENQKKQGKTVNDDTHMVPTVGTHKAPPPEQKSTTSQPPPKKGKPPHSIPPNQRQNPNYDVIAATAPPSPSLKVMMSPAKTVIKTKPAPVMASYSSRGPNKIQPSILKPDVIAPGVNILAAYSLGTSPTTLLQDTRRFEFNVLQGTSMSSPHVSGIAGLLKTLHPTWSPAAIKSAIMTTGTIHLYTTTRDNTNKPIQDAFDNDLANSFDYGSGHVQPDLAIEPGLVYDLHLIDYLNFLCASEYNQQLISSLNYNRTFVCKGAHSMNDLNYPSITLPHLGLDPVTVNRTLTNVGPPGTYNVTAKLDGSKVTVVPNSLTFTKLYEKKTFKVIVQASSVLQRNKYQFGELVWSDGKHRVRSPVTVQRQ 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc123258g00001 425 Gene3D - 6 143 - -
Stsc123258g00001 425 ProSitePatterns Serine proteases, subtilase family, serine active site. 205 215 IPR023828 -
Stsc123258g00001 425 Pfam Fibronectin type-III domain 327 422 IPR041469 -
Stsc123258g00001 425 Gene3D Peptidase S8/S53 domain 144 294 IPR036852 GO:0004252|GO:0006508
Stsc123258g00001 425 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 14 421 IPR045051 -
Stsc123258g00001 425 MobiDBLite consensus disorder prediction 64 125 - -
Stsc123258g00001 425 CDD PA_subtilisin_like 1 81 - -
Stsc123258g00001 425 SUPERFAMILY Subtilisin-like 148 285 IPR036852 GO:0004252|GO:0006508
Stsc123258g00001 425 ProSiteProfiles Serine proteases, subtilase domain profile. 1 281 - -
Stsc123258g00001 425 Pfam Subtilase family 141 252 IPR000209 GO:0006508|GO:0008236
Stsc123258g00001 425 MobiDBLite consensus disorder prediction 92 112 - -
Stsc123258g00001 425 Gene3D - 298 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc123258g00001 Stsc-Chr123258 618 4953 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc123258g00001 1 423 Subtilisin-like Serine Gene Family AT2G04160 44.471 1.77e-104 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc123258g00001 - - aip:107635251 660.603