Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc123201g00003 ATGATACTATTGATGAAGATGAAGGGTGCGGCGAATGTATTGAACGGGTTGAAACCAGTGATACTTATGGTGTTGGTGCAGGTTCTGTTTACTTCTACGAATGTGTTATACAAGCTTGCTATCAATGATGGAATGAGTGTTAAGGTTCTTACTGCTTATCGTCTTGCCTTTGCTGCTGCTTTCACCGTTCCTTTTGCTCTCTTTTCTGAAAGGAATAAGAGACCAAAGATAACTTGGAGGGTGATTTTCATGTCATTTCTTTGCGGCTTGTTTGGGGGAAGTTTGTTTCAGAACCTTTTCTACGAGGCACTGGCTTTAACATCAGCAACTTATGTATCTGCCATCTACAACCTGGTATCAGGCATCACCTTTGTGTTGGCCATAGCCTTCGGTTTTGAGAAATTGAAACTGGGGGAAGCAGCAGGGAAGGCCAAGGTGTTTGGAACTTTGATTGGAATTGCTGGGGCTATGGTATTGACCTTTGTCAAAGGAATGCAAATTAATATGCCATTCCATGTCAACCTTTTGAAGAACAATAATCCATCATCACAACATCACCATTCGCATAGCAGTAATGACTTGTTGGGGGTTGTGTGCGCCTTAGCTAGCTGCTTCTCTAATGCTTTCTGGATTATCATTCAAGCTAAGATGATCATGGAATACCCAAGTCAAAACTCAAGCACAGCTTTGATGCTTACAGCAGCAACAATTCAAGCCACTATTTTTGCTTTTTGTAGTGAGAGGGATCTCTCACAATGGACGCTTGGTTGGAATATCAGGCTATTGGCTTCGGCTTTTTCGGGAATTGTGGGGTCTGGAGTGGTGTTTCTTATCATATCATGGTGCATAAAAAAGAGAGGGCCATTATTTGCCTCCATTTTCAACCCTCTCATGCTTTTGCTTGTGGGCTGTTGTGGGTTCTTTCATGTTGGATGA 936 0.4241 MILLMKMKGAANVLNGLKPVILMVLVQVLFTSTNVLYKLAINDGMSVKVLTAYRLAFAAAFTVPFALFSERNKRPKITWRVIFMSFLCGLFGGSLFQNLFYEALALTSATYVSAIYNLVSGITFVLAIAFGFEKLKLGEAAGKAKVFGTLIGIAGAMVLTFVKGMQINMPFHVNLLKNNNPSSQHHHSHSSNDLLGVVCALASCFSNAFWIIIQAKMIMEYPSQNSSTALMLTAATIQATIFAFCSERDLSQWTLGWNIRLLASAFSGIVGSGVVFLIISWCIKKRGPLFASIFNPLMLLLVGCCGFFHVG 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc123201g00003 311 PANTHER WAT1-RELATED PROTEIN 18 308 IPR030184 GO:0016020|GO:0022857
Stsc123201g00003 311 Pfam EamA-like transporter family 18 160 IPR000620 GO:0016020
Stsc123201g00003 311 Pfam EamA-like transporter family 195 308 IPR000620 GO:0016020
Stsc123201g00003 311 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc123201g00003 Stsc-Chr123201 5983 7404 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc123201g00003 17 308 Nodulin-like Gene Family AT1G25270 40.956 6.11e-75 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc123201g00003 - - gmx:100809587 407.912