Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc123201g00002 ATGATACTATTGAAGATGAAGGGTGTGGCGAATGTATTGAATGGGTTGAGACCGGTGATACTTATGGTGTTGGTGCAGGTTGCGTTTACTGCTGTAAATGTGTTCTACAAGCTTGCTATCAATGATGGAATGAGTGTTAAAGTTCTTACTGCTTATCGTCTTGCTTTTGGTGCTGCTTTCACTGTTCCTCTTGCTCTCTTTTCTGAAAGGAATAAGAGACCAAAGATGACTTGGAGGGTGCTTTTCATGTCATTTCTTTGCGGCTTGTTTGGGGGAAGTTTGTTTCAGAACCTTTTCTATGGGGCACTGGCTTTGACATCAGCAACTTTTGTGTCTGCAATCTACAACCTGGTACCAGGCATCACCTTTGTGTTGGCCGTAACCTTCGGTTTTGAGAAATTGAAACTCGGGAGAGCAGCAGGGAAGGCCAAAGTGTTTGGAACGTTGATTGGAATTGGTGGAGCTATGGTGTTGACCTTTCTCAAAGGGATGCAAATTAATATATGGACATTCCATGTCAACCTTTTGAAGAACAATCCATCATCATCACATCACCATAGTAATGACTTGTTGGGTGTTGTGTGCGCCATAGCAAGCTGCTTCTCTTATGCGTCCTGGCTCATCATTCAGACTAAGATGAGCAAGGAATACCCAAGTCACAACTCAAGCACAGCTTTGATGCTTACAGCTGCAGCAATTCAAGCCACTGTTTTTGCTTTTTGTACCGAGAGAGATCTCTCTCAATGGAAGCTTGGTTGGAATATTAGGCTATTGGCTTCCGCTTATTCGGGAATTGTGGGGTCTGGAGTAGTGTTTCTTATCATATCATGGTGCATACAAATGAGAGGGCCACTATTTGCCTCCATTTTCAATCCTCTCATGCTTGTGCTTGTGGCTGTTGCGGCTTCTTTCATGTTGGATGAGCAATTATATCTGGGAAGTGTGATTGGATCAGTGATGATAGTGTGTGGACTATACGCGGTTCTATGGGGAAAGAACAAAGAGATGAAAATGGTATCACAGTTGGTGCCATCTGAAATCATCAACCACCAGCAGCAGCAGCAGGAAGAGGATCAAGCTATTCAAGTTGTTGTTACCTCCACGCCAGTTGTCATGAACCATGACAAATGTGACCAACAACAATAA 1146 0.4346 MILLKMKGVANVLNGLRPVILMVLVQVAFTAVNVFYKLAINDGMSVKVLTAYRLAFGAAFTVPLALFSERNKRPKMTWRVLFMSFLCGLFGGSLFQNLFYGALALTSATFVSAIYNLVPGITFVLAVTFGFEKLKLGRAAGKAKVFGTLIGIGGAMVLTFLKGMQINIWTFHVNLLKNNPSSSHHHSNDLLGVVCAIASCFSYASWLIIQTKMSKEYPSHNSSTALMLTAAAIQATVFAFCTERDLSQWKLGWNIRLLASAYSGIVGSGVVFLIISWCIQMRGPLFASIFNPLMLVLVAVAASFMLDEQLYLGSVIGSVMIVCGLYAVLWGKNKEMKMVSQLVPSEIINHQQQQQEEDQAIQVVVTSTPVVMNHDKCDQQQ 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc123201g00002 381 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 160 - -
Stsc123201g00002 381 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 334 - -
Stsc123201g00002 381 Pfam EamA-like transporter family 18 159 IPR000620 GO:0016020
Stsc123201g00002 381 Pfam EamA-like transporter family 191 329 IPR000620 GO:0016020
Stsc123201g00002 381 PANTHER WAT1-RELATED PROTEIN 18 349 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc123201g00002 Stsc-Chr123201 3477 5343 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc123201g00002 16 358 Nodulin-like Gene Family AT1G25270 42.197 4.72e-95 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc123201g00002 - - gmx:100798755 525.783