Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc123201g00001 ATGATACTATTGAAGATGAAGGGTGTGGCGAATGTATTGAATGGGTTGAGACCGGTGATACTTATGGTGTTGGTGCAGGTTGCGTTTACTGCTGTAAATGTGTTCTACAAGCTTGCTATCAATGATGGAATGAGTGTTAAAGTTCTTACTGCTTATCGTCTTGCTTTTGGTGCTGCTTTCACTGTTCCTCTTGCTCTCTTTTCTGAAAGGAATAAGAGACCAAAGATGACTTGGAGGGTGCTTTTCATGTCATTTCTTTGCGGCTTGTTTGGGGGAAGTTTGTTTCAGAACCTTTTCTATGGGGCACTGGCTTTGACATCAGCAACTTTTGTGTCTGCAATCTACAACCTGGTACCAGGCATCACCTTTGTGTTGGCCGTAACCTTCGGTTTTGAGAAATTGAAACTCGGGAGAGCAGCAGGGAAGGCCAAAGTGTTTGGAACGTTGATTGGAATTGGTGGAGCTATGGTGTTGACCTTTCTCAAAGGGATGCAAATTAATATATGGACATTCCATGTCAACCTTTTGAAGAACAATCCATCATCATCACATCACCATAGTAATGACTTGTTGGGTGTTGTGTGCGCCATAGCAAGCTGCTTCTCTTATGCGTCCTGGCTCATCATTCAGACTAAGATGAGCAAGGAATACCCAAGTCACAACTCAAGCACAGCTTTGATGCTTACAGCTGCAGCAATTCAAGCCACTGTTTTTGCTTTTTGTACCGAGAGAGATCTCTCTCAATGGAAGCTTGGTTGGAATATTAGGCTATTGGCTTCCGCTTATTCGGGAATTGTGGGGTCTGGAGTAGTGTTTCTTATCATATCATGGTGCATACAAATGAGAGGGCCACTATTTGCCTCCATTTTCAATCCTCTCATGCTTGTGCTTGTGGCTGTTGCGGCTTCTTTCATGTTGGATGAGCAATTATATCTGGGAAGGTAA 945 0.4339 MILLKMKGVANVLNGLRPVILMVLVQVAFTAVNVFYKLAINDGMSVKVLTAYRLAFGAAFTVPLALFSERNKRPKMTWRVLFMSFLCGLFGGSLFQNLFYGALALTSATFVSAIYNLVPGITFVLAVTFGFEKLKLGRAAGKAKVFGTLIGIGGAMVLTFLKGMQINIWTFHVNLLKNNPSSSHHHSNDLLGVVCAIASCFSYASWLIIQTKMSKEYPSHNSSTALMLTAAAIQATVFAFCTERDLSQWKLGWNIRLLASAYSGIVGSGVVFLIISWCIQMRGPLFASIFNPLMLVLVAVAASFMLDEQLYLGR 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc123201g00001 314 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 312 - -
Stsc123201g00001 314 PANTHER WAT1-RELATED PROTEIN 18 312 IPR030184 GO:0016020|GO:0022857
Stsc123201g00001 314 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 160 - -
Stsc123201g00001 314 Pfam EamA-like transporter family 18 159 IPR000620 GO:0016020
Stsc123201g00001 314 Pfam EamA-like transporter family 191 312 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc123201g00001 Stsc-Chr123201 3477 5343 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc123201g00001 16 313 Nodulin-like Gene Family AT1G25270 42.857 8.50e-85 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc123201g00001 - - gmx:100809587 456.062