Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc123014g00001 GAACTTGGTCATCTGGAATCAAGCTTTGGTATCTGTCTCCATGTGGACCTCTGCCTGGGTGGCTTTGTATTGCCTTTTGCCCGTGAGCTTGGGTACCCTATACCACCTTTTGATTTTTCTGTTAAAGGAGTATCTTCAATATCAGTGGACGTGCATAAATATGATTTAGCTCCCAAAGGAACAAGTGTAGTCCTGTACAGGAACCATGAAATCAGAAAGTGTGTTAACATAAGAAAGGAGACATGA 246 0.4228 ELGHLESSFGICLHVDLCLGGFVLPFARELGYPIPPFDFSVKGVSSISVDVHKYDLAPKGTSVVLYRNHEIRKCVNIRKET 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc123014g00001 81 Gene3D - 1 74 IPR015421 GO:0003824
Stsc123014g00001 81 PANTHER - 1 74 - -
Stsc123014g00001 81 SUPERFAMILY PLP-dependent transferases 7 74 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc123014g00001 Stsc-Chr123014 5592 6913 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc123014g00001 6 70 Calmodulin-binding Proteins AT5G17330 40.000 2.21e-08 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc123014g00001 K01634 - gmx:100794743 144.05