Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc122933g00001 ATGAGAGAATCCCTTAGCCAGATTCTTGTTCACTACTATCTCTTATGTGGCCGCTTGAATTCTATAGAAGGTGGCCTTTACAAACTTGATTGTAACACAAAGGGAGCCATGCTGTATGAAGCTGAATCCACAAAATCAATGGCTGAATATGGAGACTTCTCACCAAATGATGATGCCATCAAAGAACTCATACCAAACCTTGATTACTCTCAACCCATAGAGGACATTCCTCTGTTTCTTGCACAAGTCACAAAGTTCCATGGTGGCGATGCCATTGCCATAGGAACTGCCATATCTCATACAATTAGTGATGGGGTTTCAAGCATTCACTTCATCAACTCATGGGCCAAACTCACCAGAGGAGACACATTGGACCCAAATGAATTGCCATTTCTGGACAGAACTGTGTTCACAGCCTCTCGTCTGCCGGCGTTGCGGCGTTTCGACCACCCGGAGTTTAAGCCTCCACCACTCATCCTAGGAAGAACAGATAGCAGTGAAGAACAAAAGAAGAAGACAAGGTTTGCATTGTTGAAGCTCACAGCAGAACACGTGCAGAAATTGAAGCAGAATGCAAATACTGGTTATTCTGAATCCCAAGAGAGACCGTATAGCAGATTTGAAGCCATTGGAGCACATATATGGCGATGTGCTTGCATGGCGCGTGAGCTTGACAAAAATCAACCAACCGTGGCAAGGACCGTCGTCGATGTTCGCAACAAGGTGAATCCTCCTCTGCCGAAAAACTATTTTGGAAATGCTTTGGGTATCACCGTAACACCAGTATGCCTGGTTGGAGAGATGATATCAGAGCCGCTGAGTTACGGTGCAAAAATGATAAGAGAAGCAGTGGAAAGGGTTTCAAATGACGAGTACATAAGATCGCAAATTGATGTTATAGCTCGAGGAGAGTATAGAGCAGGTATGTTCTTCGTTGGGAGCCCTACCATGGCATTTATAAGCTGGATGGGAATGCCAGTATATGAAGCAGATTTTGGTTGGGGAAAGCCAGATTATTTTGGTCCAGGTGCTGTGTCTCCCGTTGATATTGGGATGATGGCTCCAACCCCACAAGGGGATGGCTCCATGCTCATCTTCATGCATTTTCAGATTGCTCACATGGACAAGTTCCTCAACCTCTTTTGGGATACTTTGCAATACAACTAA 1167 0.4499 MRESLSQILVHYYLLCGRLNSIEGGLYKLDCNTKGAMLYEAESTKSMAEYGDFSPNDDAIKELIPNLDYSQPIEDIPLFLAQVTKFHGGDAIAIGTAISHTISDGVSSIHFINSWAKLTRGDTLDPNELPFLDRTVFTASRLPALRRFDHPEFKPPPLILGRTDSSEEQKKKTRFALLKLTAEHVQKLKQNANTGYSESQERPYSRFEAIGAHIWRCACMARELDKNQPTVARTVVDVRNKVNPPLPKNYFGNALGITVTPVCLVGEMISEPLSYGAKMIREAVERVSNDEYIRSQIDVIARGEYRAGMFFVGSPTMAFISWMGMPVYEADFGWGKPDYFGPGAVSPVDIGMMAPTPQGDGSMLIFMHFQIAHMDKFLNLFWDTLQYN 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc122933g00001 388 Gene3D - 1 155 IPR023213 -
Stsc122933g00001 388 Pfam Transferase family 2 377 - -
Stsc122933g00001 388 Gene3D - 161 381 IPR023213 -
Stsc122933g00001 388 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 1 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc122933g00001 Stsc-Chr122933 2466 4354 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc122933g00001 1 383 Monolignol Biosynthesis Gene Families AT5G48930 33.333 1.08e-74 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc122933g00001 K13065 - gmx:100779814 432.95