Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc122903g00002 ATGGTTTCGTTGTTGGACTCCCGTGATGCTTCGGAACTTTTTTTCAGGAAGGTTTTCAGAAGTGACCGTCCAAGTAGTAGCACTTGTATGGAGTTGACTCCCAACATATTGGAATATGCTCAAGGTCTTCCATTAGCAATCAAAGTAGTGGGTTCTTTCTTGTACAATCGAGATGCTTCCCAATGGAGAGATTCTTTAGGAAGATTGAAGAAATATCCAGACAAAAAGGAGGTTACAGGTGTGCTTCAAATAAGTTTTGAGCCATTGCGAAAAGAAGAAAGAGAAATATTTTTGCACATTGCTTGCTTTTTCAGGGGGCAGAGGGAAGAGTATGTAAAGCAAATTCTAGATGTTTGTGGACTACACCCTCAAATTGGAATTCCAGTTCTCAAGGAGAGATCACTCATAGCCATTGAGAACCAAGAGATTCATATGCATGACATGTTACAAGAATTGGTGCCTCCCACCAAATCGCGTCCGCCGCGGCTTCTGCCCTGCGCCAAAGGGATGACGGGAATCCTTCTCCAGCGGCGTGCCACCTTCGTCATTGGTCCGTTCTTTCTTAGCCAATTTATTAAGTGCATGAAACCTATGCAGAGGCATTAG 606 0.4373 MVSLLDSRDASELFFRKVFRSDRPSSSTCMELTPNILEYAQGLPLAIKVVGSFLYNRDASQWRDSLGRLKKYPDKKEVTGVLQISFEPLRKEEREIFLHIACFFRGQREEYVKQILDVCGLHPQIGIPVLKERSLIAIENQEIHMHDMLQELVPPTKSRPPRLLPCAKGMTGILLQRRATFVIGPFFLSQFIKCMKPMQRH 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc122903g00002 201 SUPERFAMILY "Winged helix" DNA-binding domain 77 151 IPR036390 -
Stsc122903g00002 201 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 100 IPR027417 -
Stsc122903g00002 201 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 152 IPR044974 GO:0006952
Stsc122903g00002 201 Gene3D - 5 90 IPR042197 -
Stsc122903g00002 201 Pfam NB-ARC domain 2 71 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc122903g00002 Stsc-Chr122903 198 4183 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc122903g00002 2 152 WRKY Transcription Factor Family AT5G45050 32.237 7.51e-20 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc122903g00002 - - vvo:131643801 199.134