Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc122903g00001 ATGGAGTTGACTCCCAACATATTGGAATATGCTCAAGGTCTTCCATTAGCAATCAAAGTAGTGGGTTCTTTCTTGTACAATCGAGATGCTTCCCAATGGAGAGATTCTTTAGGAAGATTGAAGAAATATCCAGACAAAAAGGAGGTTACAGGTGTGCTTCAAATAAGTTTTGAGCCATTGCGAAAAGAAGAAAGAGAAATATTTTTGCACATTGCTTGCTTTTTCAGGGGGCAGAGGGAAGAGTATGTAAAGCAAATTCTAGATGTTTGTGGACTACACCCTCAAATTGGAATTCCAGTTCTCAAGGAGAGATCACTCATAGCCATTGAGAACCAAGAGATTCATATGCATGACATGTTACAAGAATTGGGTAAGAAACTTGTTCGGGAAAAATATGCTGAAGATTTTACAGGATGCACAAACTTGACACAGGTCCACCCTTCAATTGGACTTCTTAAGAAGCTTAAATACTTGTTGCAGTGCCTCCCACCAAATCGCGTCCGCCGCGGCTTCTGCCCTGCGCCAAAGGGATGA 534 0.4157 MELTPNILEYAQGLPLAIKVVGSFLYNRDASQWRDSLGRLKKYPDKKEVTGVLQISFEPLRKEEREIFLHIACFFRGQREEYVKQILDVCGLHPQIGIPVLKERSLIAIENQEIHMHDMLQELGKKLVREKYAEDFTGCTNLTQVHPSIGLLKKLKYLLQCLPPNRVRRGFCPAPKG 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc122903g00001 177 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 71 IPR027417 -
Stsc122903g00001 177 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 141 IPR044974 GO:0006952
Stsc122903g00001 177 SUPERFAMILY "Winged helix" DNA-binding domain 48 131 IPR036390 -
Stsc122903g00001 177 Gene3D - 1 61 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc122903g00001 Stsc-Chr122903 197 4183 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc122903g00001 2 129 WRKY Transcription Factor Family AT5G45050 34.109 8.66e-22 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc122903g00001 - - vvo:131653600 188.348