Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc122790g00001 ATGGAAGCTTCGAGTTCAGATGCATCAGTGGAATTGAATTCGGATAATTCGTGTGAATCAAACAACACAGAAGAGTTCTTATGTGATGTTGATGAGCAGTATGTGCCAAAGGTTGTCATGCTTTTTCAATCACTTGAGGAAGCTATGAATTTCTATAGGGATTATGATGAACATGCAGGGTTTGCCATAAAAATAAGGAACACAAATAAGAGTAAGAAATCAAATGAGATATTGAACCAGCTGATTTCTTGTGATAGAGAAGGGGAAAGAAGGTCGGATGTGCCATTTTCTGAGTAG 297 0.3771 MEASSSDASVELNSDNSCESNNTEEFLCDVDEQYVPKVVMLFQSLEEAMNFYRDYDEHAGFAIKIRNTNKSKKSNEILNQLISCDREGERRSDVPFSE 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc122790g00001 98 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 10 92 - -
Stsc122790g00001 98 Pfam FAR1 DNA-binding domain 50 92 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc122790g00001 Stsc-Chr122790 1678 2362 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc122790g00001 FAR1 1.7e-06 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc122790g00001 - K10864 aip:110271906 75.0997