Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc122649g00003 ATGACATCAAATATCATCTTCACCTTGGCACGTTACGACAAAGTGTTTGGTAGACGAATGGTTATTGGACTTGCATATGTTGGGGTTGATGAGAAAATCTTAAGTGGTGTTGAATTAGACAAATGGATTGATATAGTTGATGGGAGCAAAAACCCAATAGCTGGGGGTGCAAAGATCCATGTCAAGCTACAATTTTTTGATGCTAAACGACACCAAAACTGGTCTCAAGGAATCAAAGATCGTAACTTTCTTGGAGTTCCTCGCACTTTCTTCTCACAACAAAAGGGATGCAAGGTTACTCTTTACCAAGATGCTCATGTCCAATATGATTTTTCCCCAAAAATAGTGCTTGATGGAGGTGACACTTACAAGCCTCAAAGATGCTGGGAGGATATATTTGATGCAATCAATGAAGCAAAACACTTTATATACATTGCTGGCTGGTCTCTTTACACTCAAATTTCTCTTATAAGAGATCCAAAGAGGCCAAAGCATGGAGGAGGAGGAGACATAACACTTGGCGAGCTTCTCAAGAAAAAGGCCGACGACGGAGTCAAGGTTGTACTGCTTCTATGGGAGGATGGAATTCGAGTTCCAATAATTGGTTATCCCATCAAAATCATGCATACTCATGATAAAGAAACCCAAAGCTATTTTAAGGACACTAATGTGCACTGCGTTTTATGCTCTCGTGACAGTGATTTTTTCTCTCATCATCAAAAGATTGTGTTGGTGGATGCTAAGTTGCCAGATAATGGAGAAGAGTCAAACAAAAGAAGAATTGTGAGTTTTATTGGAGGTCTTGATCTCTGTGACGGAAGATATGATACTCAATTTCATTCTCTTTTTCAAACTTTAGCCACTGAACACAGTAAAGATTTCTATCAACCAAGCATTGATGATTCCACAATTGAAAAAGGTGGTCCTAGGGAACCATAG 939 0.393 MTSNIIFTLARYDKVFGRRMVIGLAYVGVDEKILSGVELDKWIDIVDGSKNPIAGGAKIHVKLQFFDAKRHQNWSQGIKDRNFLGVPRTFFSQQKGCKVTLYQDAHVQYDFSPKIVLDGGDTYKPQRCWEDIFDAINEAKHFIYIAGWSLYTQISLIRDPKRPKHGGGGDITLGELLKKKADDGVKVVLLLWEDGIRVPIIGYPIKIMHTHDKETQSYFKDTNVHCVLCSRDSDFFSHHQKIVLVDAKLPDNGEESNKRRIVSFIGGLDLCDGRYDTQFHSLFQTLATEHSKDFYQPSIDDSTIEKGGPREP 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc122649g00003 312 Gene3D Endonuclease Chain A 116 302 - -
Stsc122649g00003 312 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 234 274 IPR001736 GO:0003824
Stsc122649g00003 312 SUPERFAMILY Phospholipase D/nuclease 69 280 - -
Stsc122649g00003 312 Pfam Phospholipase D Active site motif 235 274 IPR001736 GO:0003824
Stsc122649g00003 312 PANTHER PHOSPHOLIPASE D 4 312 IPR015679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc122649g00003 Stsc-Chr122649 7660 9614 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc122649g00003 1 312 Phospholipase D Gene Family (Wang group) AT1G52570 55.692 4.06e-123 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc122649g00003 K01115 - gmx:100784434 377.481