Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc122638g00001 ATGGCACAGGAAAATAAGGGTAGAGTTTGTGTGACTGGAGGCACAGGTTTTCTTGGTTCATGGCTCATCAAAACACTCCTTGAGGATGGTTACACTGTTAACACCACTGTTAGATTTGATTCAAAAAGGAAGAGAGACATAAGCTTCCTCACAAACCTACCAAATGCAACAGAAAACCTAAAAGTGTTCAATGCTGATCTAAGCAAGCCAGACAGTTTCAAGGAAGCAATTGAAGGTTGCATAGGGGTATTCCACGTGGCATCACCAATAGACTTCGAAGTGAACGAGCCCGAAGAAACGGTGACAAAGAGAACCATTGATGGAGCCTTAGGGATCCTAGAAGCATGCAAGAATTCAAAGACAGTGAAGAGGGTTGTTTACACTTCAAGTGGATCTGCTGTTTGCTGCAAAGAATCTGAGGAGGGTGATGGTTTTGATGAGAGTAGTTGGAGTGATGTTGATTTTCTTAGGAAGTTGAAGCCATTTGGATGGTCCTATGCGGTTTCAAAGACATTGACTGAGAAAGCCATGCTTGAGTTCGGAGAAAACAATGGTTTGGAAGTTGTGTCTTTGATTGCTCCTCTTATTGTTGGACCTTTCATTTGTCCAAAGCTTCCTGATTCAGTTGAGAAAGGACTTGTTTTGCTCTTAGGGAACAAGGATAAAATTGGCATCACAAAATTCCATATGGTGCATGTTGATGATGTAACTAGAGCACATGTATTCTTGTTTGAGCATCCTAACCCTAAAGGGAGATATAATTGCTCACCATTTTCTATAAGTATTGAAGAAATGGCTCAAATTCTTTCAGCCATGTACCCAGAATTTGAAATACCAGCAACAGATGAGCTGAAGGAAATTAAAGGGTTCAAGCTACCACGTTTAATCTCAAAGAAACTGATAGAAGCTGGATTTGAGTTCAAGAATAGCATTCAGGATATGTTTAAGGATGCAATTGAATGCTGTGTTGATAAGGGATTTCTTTCAGATCCATCCATCTCTAATAATTAA 1011 0.3996 MAQENKGRVCVTGGTGFLGSWLIKTLLEDGYTVNTTVRFDSKRKRDISFLTNLPNATENLKVFNADLSKPDSFKEAIEGCIGVFHVASPIDFEVNEPEETVTKRTIDGALGILEACKNSKTVKRVVYTSSGSAVCCKESEEGDGFDESSWSDVDFLRKLKPFGWSYAVSKTLTEKAMLEFGENNGLEVVSLIAPLIVGPFICPKLPDSVEKGLVLLLGNKDKIGITKFHMVHVDDVTRAHVFLFEHPNPKGRYNCSPFSISIEEMAQILSAMYPEFEIPATDELKEIKGFKLPRLISKKLIEAGFEFKNSIQDMFKDAIECCVDKGFLSDPSISNN 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc122638g00001 336 FunFam Dihydroflavonol reductase 6 330 - -
Stsc122638g00001 336 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 325 IPR036291 -
Stsc122638g00001 336 Pfam NAD dependent epimerase/dehydratase family 9 254 IPR001509 -
Stsc122638g00001 336 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 7 319 - -
Stsc122638g00001 336 Gene3D - 6 328 - -
Stsc122638g00001 336 CDD FR_SDR_e 9 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc122638g00001 Stsc-Chr122638 1249 3590 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc122638g00001 1 328 Monolignol Biosynthesis Gene Families AT2G02400 38.066 6.07e-63 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc122638g00001 - K13265 gmx:100793687 493.812