Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc122604g00001 ATGTCCAGACAACACGATTCTCGCTCCCTAAACTGGCACTACACAGAGCTCGACGACAAAGACCTCGAAATCCGCGGCAAAACGCTCTTCTTCGTCATCGTCCTCTTCTCCATTATCATCCTCATCACCGTCCTCTTCCTCTACACGCGCTGGGTCTGCCGCTACAACCACCACCGCAATTCCTCCACCCACGCGTTCCACGCGCGTCACGCGCCGCCCTCATCAATTCCTTCTCAGGGTTTGGACCCGGCATCGATCAAGAAACTTCCGATCATCCTCCACCAGGCGCCGGCGGAGCCCCACGGAGGCGCGTGGGAGGAGACGGAGTGTTGCATATGCCTGGGAGAGTTCATCGACGGCGAGAAATTGAAGGGCTTCACTCAAACTTGA 390 0.5718 MSRQHDSRSLNWHYTELDDKDLEIRGKTLFFVIVLFSIIILITVLFLYTRWVCRYNHHRNSSTHAFHARHAPPSSIPSQGLDPASIKKLPIILHQAPAEPHGGAWEETECCICLGEFIDGEKLKGFTQT 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc122604g00001 129 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 25 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc122604g00001 Stsc-Chr122604 2879 3351 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc122604g00001 10 124 C3H Transcription Factor Family AT3G11110 35.294 6.71e-16 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc122604g00001 - - aip:107623622 216.083