Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc122573g00001 ATGGAGAAGATTTCTCCAAAAAGTTCGAGCACTCAGGCCAAAGTCTTGGGTTCTTTAGTATCAATATTAGGTGCACTCATAGTAGTTCTTTACAAGGGTCCAACATTATTCTCAGGGTCATCATCACTACACCATTCACCTCATGCTGATTCTCTAAAGAGCTCATCATCCCAGCAAAATTGGGTTATTGGAGGGTTTCTTATTGCCATTGAGTTCATTCTTGTTCCAGTTTGGTACATTGTTCAGACCAATGTAATCAAAGACTATCCAGCAGAGATTATTGTGGTGTTCTTGTACAACTTGTGTGGGACTCTCATATCTGCACCAGTGTGCTTACGGTTAGAAGAATCAAACTTAAGTGGTTGGAGGATTAAGCCTGATATAACACTAATCGCCATTTTATACTCTGGATTCTTTGTCACAGGTCTAAGCAGTTTGGTCCACACATGGGGTATCCATATTAAAGGCCCTGTATATATATCAAGTTTTAAGCCTGTGTCTATAGCCATAGCTGCTGCTTTCAGTGCTATATTTCTTGGTGATCCACTATATTTGGGGATTGTTGTGGGAGGAGTAATAATATCAATTGGATTTTACTCTATTATATGGGGTAAAGCAAAAGAAGAATTGAGTGAGTACAGTGATTCAAGCCAAACTCAACCTGCATCCAAAACCCATCCTTTGTTACAGAGCTACAATGTGAAAGATAGTAGTGAAACAAGTTGTAATCATTATTGA 738 0.3875 MEKISPKSSSTQAKVLGSLVSILGALIVVLYKGPTLFSGSSSLHHSPHADSLKSSSSQQNWVIGGFLIAIEFILVPVWYIVQTNVIKDYPAEIIVVFLYNLCGTLISAPVCLRLEESNLSGWRIKPDITLIAILYSGFFVTGLSSLVHTWGIHIKGPVYISSFKPVSIAIAAAFSAIFLGDPLYLGIVVGGVIISIGFYSIIWGKAKEELSEYSDSSQTQPASKTHPLLQSYNVKDSSETSCNHY 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc122573g00001 245 PANTHER WAT1-RELATED PROTEIN 1 216 IPR030184 GO:0016020|GO:0022857
Stsc122573g00001 245 Pfam EamA-like transporter family 64 202 IPR000620 GO:0016020
Stsc122573g00001 245 SUPERFAMILY Multidrug resistance efflux transporter EmrE 99 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc122573g00001 Stsc-Chr122573 7035 8721 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc122573g00001 1 243 Nodulin-like Gene Family AT5G40230 50.000 7.01e-82 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc122573g00001 - - gmx:100805667 292.737