Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc122504g00001 ATGCCCCTCTACATCAAAATCCTCAAACACAATGACTCAACCAAGAAATCAAAGAAGCCTAGGCTCCCACCAGGTCCCAAACCATGGCCTATAGTTGGTAACCTCCCTGAAATGCTTGCTAACAAACCCACATTCAGATGGATTCAAAACATCATGAATGATCTCAACACCGAAATTGCATGCATCCGTTTAGGTAACATTCATGTCATCCCGGTGACAAGCCCTTCAATTGCACGTGAGATTTTAATGAAGCAGAATGCTAGATTCGCATCAAGGCCATTGAATTGGTCTAGTGAGCATGTCTCATTGGGGTACCTATCCGCGGCTCTAACACCATGCGAAGGACAATCGAAGAAAATGAGAAGATTAATCACCAATGAATTGGTGTCTCCGGTTCGACTTCAATGGCTACATGACAAAAGGGCTGAAGAAGCCGACAACCTTGTCCGGTTAGTGTACAACCAATGCAAGAATGGAAGTGCCTTAGTGGATATAAGGCTTGCAGGGAAACACTATGCCGGAAACTTGATCAGGAGGTTGCTCTTCAACAAGAGGTACTTTGGTAATGGTAGAGAAGATGGAGGACCAGGTGCTGAGGAATTGGAACATGTTGAAGCATTGTTGATTGTGCTAAAGTACCTTTTTGCATTTTCTGTTTCTGATTATGTTTCATTGTTGAGGGAGTTAGACTTGGATGGTCACAAGAAAGAAATGAAAGAGGCTACTAATACTATAAGGAAGTACCATGATCCCATCATTGAAGAAAGGATTCATCAATGGAGGAATGGGACAAAGACAAATCAAGAGGATTTGCTTGATGTTCTTATATCTCTTAAAGATGCTACCAACAATCCACTTTTGAGTGCGGAGGAAATCAAAGCTCAAATTATGGAAATTATGATAGCAACAATAGATAATGCATACAATAATGTTGAATGGGTATTCTCTGAGATGCTAAATCAACCAAAGCTCCTTCAAAAGGCCACAGAGGAACTAGACAATGTGATTGGAAAAGAGCGTACAGTGCAAGAATCAGATTTACCAAATCTCAATTATGCAAAGGCATGTATAAAAGAAGGCTTTCGACTTCACCCAATCGATGACTTCAACGTTCCTCATGTCGCCATGGAAGACACCAAAGTGTTTAACTACTTCATTCCAAAGGGTAGTCATGTTCATATCAGGAGACAGGGTATTGGTCAAAACCCAAGAATTTGGAAAGAGCCATTGAAATTCAACCCCGAAAGACACTTGATGAATGATAGGCCTAGTTTAACTTTAATTGATTCTAATTTAGAGACTTTCATATTTGGCACTGGAAAGCGTGGTTGCCCTGGAGTCACACTTGGTTCTACAATTACTATTATGTTATTTGCAAGATTGGTGCATGGATTCACTTGGAATACACCACCCAATGAGAAAATCATTGATCTCTCTGAATGTGCAAGGGATACTTCAAAAGCTAAACCACTTGTGGCATTGGGAAAACCAAGGTTAGCAGCAGAGGTTTATCACAAAATGAAAAATATCAAATGA 1536 0.4043 MPLYIKILKHNDSTKKSKKPRLPPGPKPWPIVGNLPEMLANKPTFRWIQNIMNDLNTEIACIRLGNIHVIPVTSPSIAREILMKQNARFASRPLNWSSEHVSLGYLSAALTPCEGQSKKMRRLITNELVSPVRLQWLHDKRAEEADNLVRLVYNQCKNGSALVDIRLAGKHYAGNLIRRLLFNKRYFGNGREDGGPGAEELEHVEALLIVLKYLFAFSVSDYVSLLRELDLDGHKKEMKEATNTIRKYHDPIIEERIHQWRNGTKTNQEDLLDVLISLKDATNNPLLSAEEIKAQIMEIMIATIDNAYNNVEWVFSEMLNQPKLLQKATEELDNVIGKERTVQESDLPNLNYAKACIKEGFRLHPIDDFNVPHVAMEDTKVFNYFIPKGSHVHIRRQGIGQNPRIWKEPLKFNPERHLMNDRPSLTLIDSNLETFIFGTGKRGCPGVTLGSTITIMLFARLVHGFTWNTPPNEKIIDLSECARDTSKAKPLVALGKPRLAAEVYHKMKNIK 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc122504g00001 511 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 14 505 - -
Stsc122504g00001 511 Gene3D Cytochrome P450 7 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc122504g00001 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Stsc122504g00001 511 Pfam Cytochrome P450 23 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc122504g00001 511 SUPERFAMILY Cytochrome P450 23 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc122504g00001 511 PRINTS E-class P450 group I signature 77 98 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc122504g00001 511 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc122504g00001 511 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc122504g00001 511 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc122504g00001 511 PRINTS E-class P450 group I signature 172 190 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc122504g00001 511 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc122504g00001 511 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc122504g00001 Stsc-Chr122504 2557 4626 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc122504g00001 22 504 Cytochrome P450 AT5G05260 53.988 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc122504g00001 - K12153 gmx:100809902 624.78