Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc122488g00002 ATGATGCAGCTCTCATCTCAGACAAATGAACTATATCAGCTAGCTGCTGTTGCTTTCTGCTTGCTCTCTGCATGGTGCAGTGATAAGCTCGGCCTTAGTCTTGAGCTGGGTTCATTTATGGCTGGTGTTATGGTTTCTACAACAGATTTTGCCCAACATACTTTGGATCAGGTGGAACCAATTCGAAACCTATTTGCAGCTCTTTTTCTCTCAAGTATCGGAATGCTTATACATGTGCAATTCCTTTGGAACCATGTTGATATCTTGCTGGCATCTGTTATTCTGGTTATAGTTGTTAAGACAGCTGTTGTTGCAGTAGTTACAAAGGCATTTGGGTATAGCATTAGAACGTCATTTCTTGTTGGTATTTCGCTTGCTCAGATTGGAGAATTTGCTTTCGTTCTCCTCAGTCGTGCTTCGAATCTCAATCTTGTTGAGGGGAAAATGTATCTCCTTCTTCTCGGGACAACGGCTTTCAGTCTGGTTACCACCCCACTATTGTTTAAGTTGATACCTCTTGTCATGAATCTTGGTGTTCTCATGCACTGGTTCCCCTCCGAAAATACCACACAGAATGAGGTTCCTCTCTCTCTCTCTCTCTCTCACACACACACACACACATATTTACACCTTAGTGTTGCTAATGAATATAATCCGTTTTCTACCCTTAATAGGCGAAAGTTTCCTTGA 690 0.4203 MMQLSSQTNELYQLAAVAFCLLSAWCSDKLGLSLELGSFMAGVMVSTTDFAQHTLDQVEPIRNLFAALFLSSIGMLIHVQFLWNHVDILLASVILVIVVKTAVVAVVTKAFGYSIRTSFLVGISLAQIGEFAFVLLSRASNLNLVEGKMYLLLLGTTAFSLVTTPLLFKLIPLVMNLGVLMHWFPSENTTQNEVPLSLSLSHTHTHTYLHLSVANEYNPFSTLNRRKFP 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc122488g00002 229 Pfam Sodium/hydrogen exchanger family 6 169 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Stsc122488g00002 229 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 1 198 IPR045158 GO:0015386|GO:0071805|GO:1902600
Stsc122488g00002 229 Gene3D - 2 176 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc122488g00002 Stsc-Chr122488 800 2570 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc122488g00002 1 206 Antiporters AT5G51710 81.553 1.63e-114 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc122488g00002 K26735 - qsa:O6P43_008294 333.569