Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc122488g00001 ATGATGCAGCTCTCATCTCAGACAAATGAACTATATCAGCTAGCTGCTGTTGCTTTCTGCTTGCTCTCTGCATGGTGCAGTGATAAGCTCGGCCTTAGTCTTGAGCTGGGTTCATTTATGGCTGGTGTTATGGTTTCTACAACAGATTTTGCCCAACATACTTTGGATCAGGTGGAACCAATTCGAAACCTATTTGCAGCTCTTTTTCTCTCAAGTATCGGAATGCTTATACATGTGCAATTCCTTTGGAACCATGTTGATATCTTGCTGGCATCTGTTATTCTGGTTATAGTTGTTAAGACAGCTGTTGTTGCAGTAGTTACAAAGGCATTTGGGTATAGCATTAGAACGTCATTTCTTGTTGGTATTTCGCTTGCTCAGATTGGAGAATTTGCTTTCGTTCTCCTCAGTCGTGCTTCGAATCTCAATCTTGTTGAGGGGAAAATGTATCTCCTTCTTCTCGGGACAACGGCTTTCAGTCTGGTTACCACCCCACTATTGTTTAAGTTGATACCTCTTGTCATGAATCTTGGTGTTCTCATGCACTGGTTCCCCTCCGAAAATACCACACAGAATGAGGCGAAAGTTTCCTTGAGCGAAACAGAAAGAATGTTGTGA 618 0.4239 MMQLSSQTNELYQLAAVAFCLLSAWCSDKLGLSLELGSFMAGVMVSTTDFAQHTLDQVEPIRNLFAALFLSSIGMLIHVQFLWNHVDILLASVILVIVVKTAVVAVVTKAFGYSIRTSFLVGISLAQIGEFAFVLLSRASNLNLVEGKMYLLLLGTTAFSLVTTPLLFKLIPLVMNLGVLMHWFPSENTTQNEAKVSLSETERML 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc122488g00001 205 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 1 198 IPR045158 GO:0015386|GO:0071805|GO:1902600
Stsc122488g00001 205 Pfam Sodium/hydrogen exchanger family 6 169 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Stsc122488g00001 205 Gene3D - 2 176 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc122488g00001 Stsc-Chr122488 785 2570 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc122488g00001 1 200 Antiporters AT5G51710 84.000 3.12e-116 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc122488g00001 K26735 - pvu:PHAVU_004G1259000 337.806