Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc122466g00001 TGGTCTCCTCTTAACTTTGTCATTGGGAGTTCATTCCTGATTTTCCTTTTGGCCGCTCGATTTATTGGCAGAAGGAACAAGAAACTTTTCTGGCTGCCAGCTATAGCTCCTCTTCTATCGGTTATACTGTCAACTTTGGTTGTATTTTTATCCAAAGCTGATAAGCATGGGGTTAACATAATTAAGCATGTTCAAGGAGGGCTTAATCCAAGTTCAGTTCACAAGTTACAATTAAATGGCCCACATGTTGGACAAGCAGCTAAAATTGGATTGATTTCTGCCATTATAGCTCTTACGGAAGCAATAGCGGTTGGAAGATCTTTTGCTAACATCAAAGGATATCATCTTGATGGGAACAAAGAAATGTTGGCAATGGGTTGCATGAACATTGCAGGATCATTAACTTCCTGCTACGTGTCAACTGGTTCGTTCTCAAGAACAACGGTGAATTTTAGTGCAGGGTGCAAAACAGCAGTGTCAAACATAGTGATGGCGGTAACGGTGCTGCTATGCTTGGAATTGTTTACAAGATTATTGTATTACACTCCAATGGCAATACTTGCGTCTATAATCCTATCAGCATTACCTGGATTGATAGACATTGGTGAAGCATATCACATATGGAAGGTTGATAAGTTCGACTTTCTTGCATGCCTTGCTGCTTTCTTCGGAGTCTTCTTTGTATCCGTTGAGATTGGTCTTCTTATTGCGGTGTCAATCTCATTTGCAAAGATATTACTACAATCAATTAGACCTGGTGTTGAAGTTCTAGGAAGAATTCCAACCACAGAAGCTTATTGCGATGTTGCTCAGTATCCCATGGCCGTAACGACCCCTGGGATACTAGTGATTCGCATAAGCTCTGGATCACTTTGCTTCGCAAATGCCGGTTTTGTTAGAGAAAGAATACTGAAGTGGGTGGAGGGAGAAGAAGAAGATAACATTGAAGAAGCTGCTAAAGGAAGGGTGCAAGCTATAATCATTGACATGACCGACCTCACCAATGTTGATACTTCTGGAATCCTAGCACTGGAGGAACTGCATAAGAGGTTGCTTTCACGTGGTGTACAATTGGCTATGGTAAATCCAAGGTGGGTAGTGATTCATAAGCTTAAAGTGGCAAAGTTTGTTGATAAAATTGGAAAAGAAAGGGTTTTCCTTACTGTTGCTGAAGCGGTAGATGCTTGTTTATCTTCTAGATTTGCCAACTCTGCTTGA 1218 0.4105 WSPLNFVIGSSFLIFLLAARFIGRRNKKLFWLPAIAPLLSVILSTLVVFLSKADKHGVNIIKHVQGGLNPSSVHKLQLNGPHVGQAAKIGLISAIIALTEAIAVGRSFANIKGYHLDGNKEMLAMGCMNIAGSLTSCYVSTGSFSRTTVNFSAGCKTAVSNIVMAVTVLLCLELFTRLLYYTPMAILASIILSALPGLIDIGEAYHIWKVDKFDFLACLAAFFGVFFVSVEIGLLIAVSISFAKILLQSIRPGVEVLGRIPTTEAYCDVAQYPMAVTTPGILVIRISSGSLCFANAGFVRERILKWVEGEEEDNIEEAAKGRVQAIIIDMTDLTNVDTSGILALEELHKRLLSRGVQLAMVNPRWVVIHKLKVAKFVDKIGKERVFLTVAEAVDACLSSRFANSA 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc122466g00001 405 PANTHER SULFATE TRANSPORTER 5 397 IPR001902 GO:0016020|GO:0055085
Stsc122466g00001 405 SUPERFAMILY SpoIIaa-like 276 396 IPR036513 -
Stsc122466g00001 405 Pfam Sulfate permease family 2 220 IPR011547 GO:0016020
Stsc122466g00001 405 Pfam STAS domain 272 392 IPR002645 -
Stsc122466g00001 405 ProSiteProfiles STAS domain profile. 288 396 IPR002645 -
Stsc122466g00001 405 CDD STAS_SulP_like_sulfate_transporter 272 389 - -
Stsc122466g00001 405 NCBIfam sulfate permease 1 392 IPR001902 GO:0016020|GO:0055085
Stsc122466g00001 405 FunFam Sulfate transporter 31 251 399 - -
Stsc122466g00001 405 Gene3D STAS domain 251 399 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc122466g00001 Stsc-Chr122466 109 5095 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc122466g00001 1 397 Inorganic Solute Cotransporters AT5G10180 66.080 0.0 544
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc122466g00001 K17469 - gmx:100805269 670.233