Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc122444g00001 ATGCTTAGACAGGAGAATGAGAAGCTCAGAGCTGAGAATAGTTTGATGAAGGAAGCCATGTCTAACCCAGTATGCAACAACTGTGGTGGCCCAGCCATTCCTGGCCAAATTTCATTCGAGGAGCACCAGATTAGAATTGAAAATGCTCGACTGAGGGATGAATTGAACCGCATATGTGCCTTGGCGAACAAGTTCCTTGGCAAGCCAATCTCATCACTGACCAATCCTATAGCTATCCCAACCTCAAATTCTGGTCTAGAACTCGGTATTGGAAGGAATGGGATTGGTGTTTCAAGCCCCTTCGGAACTCCCTTGCAGATGGGACTTGATTTAGGAGATGGAGTATTGGGCACTCAAGCAGCAATGGCTGGGATGAAGTCACCATTGGGATTGATGGGAAATGATGTTCAGCTTGAGAGATCTATGCTTGTAGATGTTGCACTGGCTGCCATGGATGAATTGATTAAGATGGCTCAGGGAGATAGCCCTCTTTGGATGAAGGGCTTTGATGGTGAGAGGGAGGTACTGAATCACGAAGAGTATGCAAGGACGTTCAATCCTTGTATTGGTCCCAAACCTGCTGGTTATGTAACTGAAGCTTCAAGAGAAACTGGGATAGTTATCATCAACAGTTTGGCCCTTGTGGAAACTTTGATGGATGCGAATCGATGGTTGGAGATGTTTCCATCAATGATTGCTAGAGCTGTGACCCTTGATGTTATATCTAATGGGATGGGTGGAACCAGAAATGGTGCTTTGCAACTGATGCATTCGGAGATTCAATTGCTTTCACCACTAGTCCCTATTCGTCAAGTGAAATTCCTCCGGTTCTGTAAGCAGCATGCGGAAGGTGTATGGGCTGTGGTTGATGTTTCTGTTGAGATCGGTCGCGACGCCTCCAATGCACAGCCTATCATGAGCTGTCGGAGGCTTCCTTCTGGCTGTGTTGTGCATGATATGCCCAATGGCTACTCCAAGGTTACTTGGGTTGAACATTGGCAGTATGATGAAAGTGTGGTGCACCAACTGTATCGTCCACTGATGAATTCTGGGTTTGGATTTGGTGCTCATAGATGGATAGCCACTCTCCAGAGGCAATGTGAATGCTTGGCAATCCTCATGTCCTCATCCATCTCAACCGACGATCACACAGCAGCATTAAGCCAAGCTGGTAGGAGAAGCATGTTGAAGCTGGCACAGCGCATGACGAGTAACTTCTGTTCTGGGGTGTGTGCCTCGTCGGCACGCAAGTGGGACAGCCTTCACATTGGAAGCTTGGGTGATGACATGAGAGTGATGACGAGGAAGAATGTGGATGACCCAGGTGAACCTCCAGGCATCGTCCTCAGTGCTGCCACTTGTGTTTGGATGCCGGTGTCACGGCAAAGGCTGTTCGAGTTTCTGCGGGACGAACGGCTTAGAAGCGAGTGGGACATTCTGTCGAATGGTGGACCTATGCAGGAGATGGTCCACATTGCGAAAGGCCAAGGCCATGCAAACTGTGTCTCTCTCTTGCGTGCTAATGGTGTCAATAATAATGCCAATGAGAGCAGCATGGTCATTCTGCAAGAGACATGGACAGATGCATCTTGCTCGGTGGTGGTATATGCACCGGTGGATGTGCCGTCTTTGAACGTGGTGATGAGCGGTGGTGATTCTGCATATGTTGCACTGTTGCCATCTGGTTTTGCCATTCTGCCGGATGGTCATTCGTCGTCGGGGTCCAACGGGAACGTAGGCAGCAAGGGTGGCGATGATGGAGGTGGATGCTTGCTGACGGTTGGGTTCCAAATATTGGTGAATAGCCTGCCGACAGCGAAGCTGACAGTGGAGTCGGTGGATACTGTGAATAACTTGATATCATGCACCATTCACAAGATCAAAGCCGCACTCACACTTTCTTCTTAA 1908 0.4885 MLRQENEKLRAENSLMKEAMSNPVCNNCGGPAIPGQISFEEHQIRIENARLRDELNRICALANKFLGKPISSLTNPIAIPTSNSGLELGIGRNGIGVSSPFGTPLQMGLDLGDGVLGTQAAMAGMKSPLGLMGNDVQLERSMLVDVALAAMDELIKMAQGDSPLWMKGFDGEREVLNHEEYARTFNPCIGPKPAGYVTEASRETGIVIINSLALVETLMDANRWLEMFPSMIARAVTLDVISNGMGGTRNGALQLMHSEIQLLSPLVPIRQVKFLRFCKQHAEGVWAVVDVSVEIGRDASNAQPIMSCRRLPSGCVVHDMPNGYSKVTWVEHWQYDESVVHQLYRPLMNSGFGFGAHRWIATLQRQCECLAILMSSSISTDDHTAALSQAGRRSMLKLAQRMTSNFCSGVCASSARKWDSLHIGSLGDDMRVMTRKNVDDPGEPPGIVLSAATCVWMPVSRQRLFEFLRDERLRSEWDILSNGGPMQEMVHIAKGQGHANCVSLLRANGVNNNANESSMVILQETWTDASCSVVVYAPVDVPSLNVVMSGGDSAYVALLPSGFAILPDGHSSSGSNGNVGSKGGDDGGGCLLTVGFQILVNSLPTAKLTVESVDTVNNLISCTIHKIKAALTLSS 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc122444g00001 635 ProSiteProfiles START domain profile. 136 372 IPR002913 GO:0008289
Stsc122444g00001 635 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 1 631 IPR042160 -
Stsc122444g00001 635 SUPERFAMILY Bet v1-like 137 369 - -
Stsc122444g00001 635 CDD START_ArGLABRA2_like 140 368 - -
Stsc122444g00001 635 Pfam START domain 146 369 IPR002913 GO:0008289
Stsc122444g00001 635 SUPERFAMILY Bet v1-like 398 628 - -
Stsc122444g00001 635 Coils Coil 2 22 - -
Stsc122444g00001 635 FunFam Homeobox-leucine zipper protein GLABRA 2 145 368 - -
Stsc122444g00001 635 SMART START_1 145 369 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc122444g00001 Stsc-Chr122444 193 3065 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc122444g00001 1 635 Homeobox Transcription Factor Family AT3G61150 60.280 0.0 780
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc122444g00001 K09338 - gmx:100794400 1095.11